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Gm5431 Gene Detail
Summary
  • Symbol
    Gm5431
  • Name
    predicted gene 5431
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645205
    NCBI Gene: 432555
  • Alliance
    gene page
  • Transcription Start Sites
    14 TSS
Location &
Maps
more
  • Sequence Map
    Chr11:48778249-48792979 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 11, 28.87 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    36 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645205
 protein coding gene Chr11:48778249-48793041 (-)
129S1/SvImJ MGP_129S1SvImJ_G0018211
 protein coding gene Chr11:47989965-48100783 (-)
A/J MGP_AJ_G0018181
 protein coding gene Chr11:46210865-46227128 (-)
AKR/J MGP_AKRJ_G0018146
 protein coding gene Chr11:47643676-47645305 (-)
BALB/cJ no annotation
C3H/HeJ MGP_C3HHeJ_G0017962
 protein coding gene Chr11:47452177-47474923 (-)
C57BL/6NJ MGP_C57BL6NJ_G0018602
 protein coding gene Chr11:49364070-49374569 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0016257
 protein coding gene Chr11:43859494-43894645 (-)
CAST/EiJ MGP_CASTEiJ_G0017526
 protein coding gene Chr11:47621386-47637546 (-)
CBA/J MGP_CBAJ_G0017934
 protein coding gene Chr11:51633816-51656907 (-)
DBA/2J MGP_DBA2J_G0018045
 protein coding gene Chr11:45892989-45905297 (-)
FVB/NJ MGP_FVBNJ_G0018038
 protein coding gene Chr11:45458950-45498143 (-)
LP/J MGP_LPJ_G0018116
 protein coding gene Chr11:48166861-48181065 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0018062
 protein coding gene Chr11:53077048-53108263 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0018641
 protein coding gene Chr11:47607916-47622666 (-)
PWK/PhJ MGP_PWKPhJ_G0017308
 protein coding gene Chr11:46286375-46324804 (-)
SPRET/EiJ MGP_SPRETEiJ_G0017098
 protein coding gene Chr11:47341320-47453282 (-)
WSB/EiJ MGP_WSBEiJ_G0017578
 protein coding gene Chr11:47421047-47436583 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    5
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    6
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 432555 NCBI Gene Model | MGI Sequence Detail 14731 C57BL/6J ±  kb
transcript NM_001024230 RefSeq | MGI Sequence Detail 2971 C57BL/6  
polypeptide NP_001019401 RefSeq | MGI Sequence Detail 566 C57BL/6  
For the selected sequence
Protein
Information
less
  • UniProt
    3 Sequences
  • InterPro Domains
    IPR051515 Immunity-related GTPase
    IPR007743 Immunity-related GTPases-like
    IPR030385 IRG-type guanine nucleotide-binding (G) domain
    IPR027417 P-loop containing nucleoside triphosphate hydrolase
Molecular
Reagents
less
  • All nucleic 6
    cDNA 6

    Microarray probesets 3
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
  • Latest
    J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory