Gm6062 Pseudogene Detail

Summary

• Symbol
  Gm6062
• Name
  predicted gene 6062

• Feature Type
  pseudogene
• IDs
  MGI:3645240
  NCBI Gene: 606531
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:70021887-70022517 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 36.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  105 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645240	pseudogene	ChrX:70021887-70022651 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014506	pseudogene	ChrX:66606527-66607157 (+)
A/J	MGP_AJ_G0014514	pseudogene	ChrX:66816642-66817272 (+)
AKR/J	MGP_AKRJ_G0014443	pseudogene	ChrX:68642860-68643490 (+)
BALB/cJ	MGP_BALBcJ_G0014470	pseudogene	ChrX:65926692-65927322 (+)
C3H/HeJ	MGP_C3HHeJ_G0014301	pseudogene	ChrX:67098863-67099493 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014938	pseudogene	ChrX:68649943-68650573 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012699	pseudogene	ChrX:66111045-66111666 (+)
CAST/EiJ	MGP_CASTEiJ_G0013937	pseudogene	ChrX:52523062-52523690 (+)
CBA/J	MGP_CBAJ_G0014287	pseudogene	ChrX:70553659-70554289 (+)
DBA/2J	MGP_DBA2J_G0014368	pseudogene	ChrX:66363089-66363719 (+)
FVB/NJ	MGP_FVBNJ_G0014361	pseudogene	ChrX:65725638-65726268 (+)
LP/J	MGP_LPJ_G0014464	pseudogene	ChrX:67439819-67440449 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014399	pseudogene	ChrX:73069061-73069691 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014908	pseudogene	ChrX:66460567-66461898 (+)
PWK/PhJ	MGP_PWKPhJ_G0013743	pseudogene	ChrX:50556304-50556921 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013543	pseudogene	ChrX:53407923-53408555 (+)
WSB/EiJ	MGP_WSBEiJ_G0014011	pseudogene	ChrX:65808481-65809111 (+)

Homology

• Gene Tree
  Gm6062
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080938 (Evidence)
• NCBI Gene
  606531

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080938	Ensembl Gene Model | MGI Sequence Detail	631	C57BL/6J
transcript	ENSMUST00000120462	Ensembl | MGI Sequence Detail	631	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;