Gm6275 Pseudogene Detail

Summary

• Symbol
  Gm6275
• Name
  predicted gene 6275

• Feature Type
  pseudogene
• IDs
  MGI:3645368
  NCBI Gene: 621984
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:135830535-135831656 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 59.10 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  145 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645368	pseudogene	ChrX:135830158-135832246 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014844	pseudogene	ChrX:134333035-134334156 (+)
A/J	MGP_AJ_G0014839	pseudogene	ChrX:133742580-133743701 (+)
AKR/J	MGP_AKRJ_G0014779	pseudogene	ChrX:138032853-138033974 (+)
BALB/cJ	MGP_BALBcJ_G0014793	pseudogene	ChrX:132139153-132140274 (+)
C3H/HeJ	MGP_C3HHeJ_G0014629	pseudogene	ChrX:134397013-134398134 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0015283	pseudogene	ChrX:138254887-138256008 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012927	pseudogene	ChrX:125679319-125680657 (+)
CAST/EiJ	MGP_CASTEiJ_G0014245	pseudogene	ChrX:115162148-115163270 (+)
CBA/J	MGP_CBAJ_G0014618	pseudogene	ChrX:142502834-142503955 (+)
DBA/2J	MGP_DBA2J_G0014702	pseudogene	ChrX:133036321-133037442 (+)
FVB/NJ	MGP_FVBNJ_G0014687	pseudogene	ChrX:132247967-132249088 (+)
LP/J	MGP_LPJ_G0014801	pseudogene	ChrX:135315939-135317060 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014732	pseudogene	ChrX:149799641-149800762 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015264	pseudogene	ChrX:133718802-133719923 (+)
PWK/PhJ	MGP_PWKPhJ_G0014045	pseudogene	ChrX:112196548-112197669 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013836	pseudogene	ChrX:115793730-115794852 (+)
WSB/EiJ	MGP_WSBEiJ_G0014324	pseudogene	ChrX:132033281-132034402 (+)

Homology

• Gene Tree
  Gm6275
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081295 (Evidence)
• NCBI Gene
  621984

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081295	Ensembl Gene Model | MGI Sequence Detail	1122	C57BL/6J
transcript	ENSMUST00000118971	Ensembl | MGI Sequence Detail	1122	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;