Cyp2d41-ps Pseudogene Detail

Summary

• Symbol
  Cyp2d41-ps
• Name
  cytochrome P450, family 2, subfamily d, member 41, pseudogene
• Synonyms
  Gm5062

• Feature Type
  pseudogene
• IDs
  MGI:3645691
  NCBI Gene: 271300
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:82662132-82666311 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 38.72 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  279 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645691	pseudogene	Chr15:82662059-82666323 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040098	pseudogene	Chr15:83403946-83408125 (-)
A/J	MGP_AJ_G0040096	pseudogene	Chr15:80364029-80368208 (-)
AKR/J	MGP_AKRJ_G0040020	pseudogene	Chr15:82682196-82686375 (-)
BALB/cJ	MGP_BALBcJ_G0040077	pseudogene	Chr15:80494909-80499088 (-)
C3H/HeJ	MGP_C3HHeJ_G0039729	pseudogene	Chr15:82678119-82682742 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040672	pseudogene	Chr15:86637129-86641308 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0039696	pseudogene	Chr15:89374082-89380699 (-)
DBA/2J	MGP_DBA2J_G0039889	pseudogene	Chr15:79877924-79882103 (-)
FVB/NJ	MGP_FVBNJ_G0039850	pseudogene	Chr15:78909967-78914148 (-)
LP/J	MGP_LPJ_G0039938	pseudogene	Chr15:83543796-83547975 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039838	pseudogene	Chr15:94311889-94316068 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040763	pseudogene	Chr15:82705872-82710051 (-)
PWK/PhJ	MGP_PWKPhJ_G0038511	pseudogene	Chr15:79846915-79851408 (-)
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Cyp2d41-ps
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  23 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (other)
  1
• Radiation induced
  2
• Targeted
  4
• Genomic Mutations
  7 involving Cyp2d41-ps
• Incidental Mutations
  Mutagenetix , APF
• Find Mice (IMSR)
  11 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000058613 (Evidence)
• NCBI Gene
  271300

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000058613	Ensembl Gene Model | MGI Sequence Detail	4180	C57BL/6J
transcript	ENSMUST00000180453	Ensembl | MGI Sequence Detail	1503	Not Applicable

References

• Summaries
  All 27

  Diseases 1

  Phenotypes 23
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:286122 Henderson CJ, et al., An Extensively Humanized Mouse Model to Predict Pathways of Drug Disposition and Drug/Drug Interactions, and to Facilitate Design of Clinical Trials. Drug Metab Dispos. 2019 Jun;47(6):601-615