Gm6031 Pseudogene Detail

Summary

• Symbol
  Gm6031
• Name
  predicted gene 6031

• Feature Type
  pseudogene
• IDs
  MGI:3645805
  NCBI Gene: 547302
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:15244015-15245068 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 10.09 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  139 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3645805	pseudogene	Chr16:15243727-15246591 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011242	pseudogene	Chr16:12499648-12500700 (+)
A/J	MGP_AJ_G0011227	pseudogene	Chr16:11815669-11816722 (+)
AKR/J	MGP_AKRJ_G0011190	pseudogene	Chr16:12312546-12313599 (+)
BALB/cJ	MGP_BALBcJ_G0011197	pseudogene	Chr16:11975267-11976319 (+)
C3H/HeJ	MGP_C3HHeJ_G0011095	pseudogene	Chr16:12394959-12396012 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0011490	pseudogene	Chr16:12669063-12670116 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010072	pseudogene	Chr16:11933430-11934488 (+)
CAST/EiJ	MGP_CASTEiJ_G0010917	pseudogene	Chr16:12387536-12388588 (+)
CBA/J	MGP_CBAJ_G0011075	pseudogene	Chr16:13222066-13223119 (+)
DBA/2J	MGP_DBA2J_G0011122	pseudogene	Chr16:11778804-11779857 (+)
FVB/NJ	MGP_FVBNJ_G0011125	pseudogene	Chr16:11827085-11828138 (+)
LP/J	MGP_LPJ_G0011217	pseudogene	Chr16:12304194-12305247 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011119	pseudogene	Chr16:12873890-12874943 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011471	pseudogene	Chr16:12262162-12263215 (+)
PWK/PhJ	MGP_PWKPhJ_G0010794	pseudogene	Chr16:12022525-12023577 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010617	pseudogene	Chr16:12243145-12244190 (+)
WSB/EiJ	MGP_WSBEiJ_G0010965	pseudogene	Chr16:12274563-12275615 (+)

Homology

• Gene Tree
  Gm6031
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000080704 (Evidence)
• NCBI Gene
  547302

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000080704	Ensembl Gene Model | MGI Sequence Detail	1054	C57BL/6J
transcript	ENSMUST00000121314	Ensembl | MGI Sequence Detail	1054	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;