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Gm5118 Gene Detail
Summary
  • Symbol
    Gm5118
  • Name
    predicted gene 5118
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3645880
    NCBI Gene: 330819
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr8:87819935-87827615 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 8, Syntenic
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    280 from dbSNP Build 142
  • Strain Annotations
    17
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645880
 lncRNA gene Chr8:87819935-87827615 (+)
129S1/SvImJ MGP_129S1SvImJ_G0007351
 lincRNA gene Chr8:88089623-88097308 (+)
A/J MGP_AJ_G0007348
 lincRNA gene Chr8:84627005-84634692 (+)
AKR/J MGP_AKRJ_G0007320
 lincRNA gene Chr8:87136097-87143782 (+)
BALB/cJ MGP_BALBcJ_G0007326
 lincRNA gene Chr8:84796718-84804403 (+)
C3H/HeJ MGP_C3HHeJ_G0007270
 lincRNA gene Chr8:87734591-87742278 (+)
C57BL/6NJ MGP_C57BL6NJ_G0007497
 lincRNA gene Chr8:91458347-91466027 (+)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0007172
 lincRNA gene Chr8:87147018-87154725 (+)
CBA/J MGP_CBAJ_G0007252
 lincRNA gene Chr8:94549848-94559774 (+)
DBA/2J MGP_DBA2J_G0007275
 lincRNA gene Chr8:84234645-84242332 (+)
FVB/NJ MGP_FVBNJ_G0007296
 lincRNA gene Chr8:83192489-83200176 (+)
LP/J MGP_LPJ_G0007356
 lincRNA gene Chr8:88208812-88216497 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0007272
 lincRNA gene Chr8:97064255-97071935 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0007499
 lincRNA gene Chr8:87132422-87140102 (+)
PWK/PhJ MGP_PWKPhJ_G0007114
 lincRNA gene Chr8:83482850-83490642 (+)
SPRET/EiJ MGP_SPRETEiJ_G0007021
 lincRNA gene Chr8:85914522-85922298 (+)
WSB/EiJ MGP_WSBEiJ_G0007232
 lincRNA gene Chr8:87564224-87571905 (+)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    29 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    20
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000098854 Ensembl Gene Model | MGI Sequence Detail 7681 C57BL/6J ±  kb
transcript ENSMUST00000184692 Ensembl | MGI Sequence Detail 2203 Not Applicable  
For the selected sequence
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 35
    Phenotypes 29
  • Earliest
    J:13049 Gruneberg H, Genetical studies on the skeleton of the mouse. XVIII. Three genes for syndactylism. J Genet. 1956;54(1):113-145
  • Latest
    J:348117 Okuma H, et al., N-terminal domain on dystroglycan enables LARGE1 to extend matriglycan on alpha-dystroglycan and prevents muscular dystrophy. Elife. 2023 Feb 1;12
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/05/2024
MGI 6.24 		The Jackson Laboratory