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Vmn2r1 Gene Detail
Summary
  • Symbol
    Vmn2r1
  • Name
    vomeronasal 2, receptor 1
  • Synonyms
    EG56544, V2r83
  • Feature Type
    protein coding gene
  • IDs
    MGI:3645892
    NCBI Gene: 56544
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr3:63988968-64016905 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 30.11 cM
  • Mapping Data
    2 experiments
Strain
Comparison
more
  • SNPs within 2kb
    611 from dbSNP Build 142
  • Strain Annotations
    16
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3645892
 protein coding gene Chr3:63962008-64142935 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027266
 protein coding gene Chr3:63140127-63164588 (+)
A/J MGP_AJ_G0027226
 protein coding gene Chr3:61261331-61285754 (+)
AKR/J MGP_AKRJ_G0027196
 protein coding gene Chr3:62490373-62517917 (+)
BALB/cJ MGP_BALBcJ_G0027239
 protein coding gene Chr3:61023939-61048017 (+)
C3H/HeJ MGP_C3HHeJ_G0026982
 protein coding gene Chr3:62710794-62736861 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027685
 protein coding gene Chr3:65440144-65468375 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025040
 protein coding gene Chr3:57734193-57754240 (+)
CAST/EiJ no annotation
CBA/J MGP_CBAJ_G0026958
 protein coding gene Chr3:67586092-67620124 (+)
DBA/2J MGP_DBA2J_G0027092
 protein coding gene Chr3:60680217-60702323 (+)
FVB/NJ MGP_FVBNJ_G0027060
 protein coding gene Chr3:59474410-59503206 (+)
LP/J MGP_LPJ_G0027203
 protein coding gene Chr3:63976605-64007876 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027077
 protein coding gene Chr3:72050374-72084181 (+)
NZO/HlLtJ no annotation
PWK/PhJ MGP_PWKPhJ_G0026167
 protein coding gene Chr3:60302282-60322392 (+)
SPRET/EiJ MGP_SPRETEiJ_G0025981
 protein coding gene Chr3:61914270-61936050 (+)
WSB/EiJ MGP_WSBEiJ_G0026509
 protein coding gene Chr3:62539188-62570444 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotypes from 2 alleles in 2 genetic backgrounds
    6 phenotype references
Phenotype Overview

adipose tissue
behavior/neurological
cardiovascular system
cellular
craniofacial
digestive/alimentary system
embryo
endocrine/exocrine glands
growth/size/body
hearing/vestibular/ear
hematopoietic system
homeostasis/metabolism
integument
immune system
limbs/digits/tail
liver/biliary system
mortality/aging
muscle
nervous system
pigmentation
renal/urinary system
reproductive system
respiratory system
skeleton
taste/olfaction
neoplasm
vision/eye

Click cells to view annotations.
Homozygous inactivation of this gene leads to altered vomeronasal sensory neuron morphology.
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    11
  • GO References
    7
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    713
  • Tissues
    4
  • cDNA Data
    2
  • Literature Summary
    3
  • Comparison Matrix
    Gene Expression + Phenotype
    • Sequences &
    Gene Models
    less
    Representative SequencesLengthStrain/SpeciesFlank
    genomic ENSMUSG00000027824 Ensembl Gene Model | MGI Sequence Detail 27938 C57BL/6J ±  kb
    transcript ENSMUST00000029406 Ensembl | MGI Sequence Detail 6860 Not Applicable  
    polypeptide ENSMUSP00000029406 Ensembl | MGI Sequence Detail 912 Not Applicable  
    For the selected sequence
    Protein
    Information
    less
    Molecular
    Reagents
    less
    • All nucleic 4
      cDNA 3
      Other 1

      Microarray probesets 3
    References
    more
    • Summaries
      All 29
      Developmental Gene Expression 3
      Diseases 1
      Gene Ontology 7
      Phenotypes 6
    • Earliest
      J:42626 Ryba NJ, et al., A new multigene family of putative pheromone receptors. Neuron. 1997 Aug;19(2):371-9
    • Latest
      J:331962 Dietschi Q, et al., Clustering of vomeronasal receptor genes is required for transcriptional stability but not for choice. Sci Adv. 2022 Nov 18;8(46):eabn7450
    Contributing Projects:
    Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
    Citing These Resources
    Funding Information
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    Send questions and comments to User Support.     		last database update
    12/10/2024
    MGI 6.24     		The Jackson Laboratory