Gm9903 Gene Detail

Summary

• Symbol
  Gm9903
• Name
  predicted gene 9903
• Synonyms
  EG433873

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3646113
  NCBI Gene: 433873
• Alliance
  gene page
• Transcription Start Sites
  2 TSS

Location &
Maps

• Sequence Map
  Chr5:33787269-33789436 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 17.83 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646113	protein coding gene	Chr5:33787089-33790387 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0029448	protein coding gene	Chr5:31812893-31815060 (+)
A/J	MGP_AJ_G0029415	protein coding gene	Chr5:30781999-30784166 (+)
AKR/J	MGP_AKRJ_G0029364	protein coding gene	Chr5:31967493-31969660 (+)
BALB/cJ	MGP_BALBcJ_G0029425	protein coding gene	Chr5:31311214-31313381 (+)
C3H/HeJ	MGP_C3HHeJ_G0029147	protein coding gene	Chr5:32007236-32009403 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0029879	protein coding gene	Chr5:33695327-33697494 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0027116	protein coding gene	Chr5:28582974-28585150 (+)
CAST/EiJ	MGP_CASTEiJ_G0028556	protein coding gene	Chr5:31087282-31089436 (+)
CBA/J	MGP_CBAJ_G0029115	protein coding gene	Chr5:34413909-34416076 (+)
DBA/2J	MGP_DBA2J_G0029263	protein coding gene	Chr5:30960583-30962750 (+)
FVB/NJ	MGP_FVBNJ_G0029222	protein coding gene	Chr5:30386208-30388375 (+)
LP/J	MGP_LPJ_G0029348	protein coding gene	Chr5:32236565-32238732 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0029252	protein coding gene	Chr5:35267944-35270111 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0029912	protein coding gene	Chr5:31478951-31481118 (+)
PWK/PhJ	MGP_PWKPhJ_G0028281	protein coding gene	Chr5:30089235-30093708 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0028112	protein coding gene	Chr5:30936265-30938426 (+)
WSB/EiJ	MGP_WSBEiJ_G0028637	protein coding gene	Chr5:31544214-31546381 (+)

Homology

• Gene Tree
  Gm9903
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  21 phenotype references
  

• All Mutations and Alleles
  7
• Chemically induced (ENU)
  1
• Chemically induced (other)
  2
• Radiation induced
  3
• Spontaneous
  1
• Genomic Mutations
  7 involving Gm9903
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  5

Tissue x Stage Matrix

• Other Mouse Links
  Allen Institute
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  25
• RefSeq
  2
• UniProt
  1

• Ensembl
  ENSMUSG00000097271 (Evidence)
• NCBI Gene
  433873

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000097271	Ensembl Gene Model | MGI Sequence Detail	2168	C57BL/6J
transcript	ENSMUST00000181102	Ensembl | MGI Sequence Detail	1747	Not Applicable
polypeptide	Q8C9Y8	UniProt | EBI | MGI Sequence Detail	129	Not Applicable

Protein
Information

• UniProt
  1 Sequence

Molecular
Reagents

• All nucleic 5

  cDNA 5

  
  

  Microarray probesets 1

References

• Summaries
  All 33

  Diseases 1

  Phenotypes 21
• Earliest
  J:5021 Batchelor AL, et al., A comparison of the mutagenic effectiveness of chronic neutron- and gamma-irradiation of mouse spermatogonia. Mutat Res. 1966 Jun;3(3):218-29
• Latest
  J:153498 Diez-Roux G, et al., A high-resolution anatomical atlas of the transcriptome in the mouse embryo. PLoS Biol. 2011;9(1):e1000582

TSS for Gm9903:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr45824	Chr5:33787259-33787274 (+)	-2 bp
Tssr45825	Chr5:33787293-33787308 (+)	32 bp