Gm8770 Pseudogene Detail

Summary

• Symbol
  Gm8770
• Name
  predicted gene 8770

• Feature Type
  pseudogene
• IDs
  MGI:3646216
  NCBI Gene: 667700
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:77829353-77830461 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.35 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  152 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646216	pseudogene	ChrX:77829307-77830658 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014546	pseudogene	ChrX:74662659-74663767 (+)
A/J	MGP_AJ_G0014557	pseudogene	ChrX:74915015-74916122 (+)
AKR/J	MGP_AKRJ_G0014481	pseudogene	ChrX:76877630-76878737 (+)
BALB/cJ	MGP_BALBcJ_G0014509	pseudogene	ChrX:73858320-73859427 (+)
C3H/HeJ	MGP_C3HHeJ_G0014343	pseudogene	ChrX:75082408-75083515 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014985	pseudogene	ChrX:76957011-76958119 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012720	pseudogene	ChrX:74305319-74306392 (+)
CAST/EiJ	MGP_CASTEiJ_G0010764	pseudogene	Chr14:7772590-7773698 (-)
CBA/J	MGP_CBAJ_G0014328	pseudogene	ChrX:79039247-79040354 (+)
DBA/2J	MGP_DBA2J_G0014408	pseudogene	ChrX:74358620-74359727 (+)
FVB/NJ	MGP_FVBNJ_G0014398	pseudogene	ChrX:73590893-73592001 (+)
LP/J	MGP_LPJ_G0014505	pseudogene	ChrX:75479025-75480133 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014441	pseudogene	ChrX:81865807-81866915 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014951	pseudogene	ChrX:74468793-74469908 (+)
PWK/PhJ	MGP_PWKPhJ_G0013773	pseudogene	ChrX:58405199-58406307 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013575	pseudogene	ChrX:61227195-61228301 (+)
WSB/EiJ	MGP_WSBEiJ_G0014045	pseudogene	ChrX:73649844-73650951 (+)

Homology

• Gene Tree
  Gm8770
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082912 (Evidence)
• NCBI Gene
  667700

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082912	Ensembl Gene Model | MGI Sequence Detail	1109	C57BL/6J
transcript	ENSMUST00000121113	Ensembl | MGI Sequence Detail	1109	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;