Gm7936 Pseudogene Detail

Summary

• Symbol
  Gm7936
• Name
  predicted pseudogene 7936

• Feature Type
  pseudogene
• IDs
  MGI:3646364
  NCBI Gene: 666114
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr18:30628057-30628426 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 18, 17.53 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  127 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646364	pseudogene	Chr18:30627957-30628487 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011429	pseudogene	Chr18:28548876-28549250 (-)
A/J	MGP_AJ_G0011423	pseudogene	Chr18:27612019-27612393 (-)
AKR/J	MGP_AKRJ_G0011387	pseudogene	Chr18:28367275-28367649 (-)
BALB/cJ	MGP_BALBcJ_G0011402	pseudogene	Chr18:27694859-27695233 (-)
C3H/HeJ	MGP_C3HHeJ_G0011290	pseudogene	Chr18:28393331-28393705 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011692	pseudogene	Chr18:29566357-29566731 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009466	pseudogene	Chr10:121284076-121287770 (-)
CAST/EiJ	MGP_CASTEiJ_G0011098	pseudogene	Chr18:28244796-28245170 (-)
CBA/J	MGP_CBAJ_G0011266	pseudogene	Chr18:30487626-30488000 (-)
DBA/2J	MGP_DBA2J_G0011319	pseudogene	Chr18:27295347-27295721 (-)
FVB/NJ	MGP_FVBNJ_G0011324	pseudogene	Chr18:27012198-27012572 (-)
LP/J	MGP_LPJ_G0011389	pseudogene	Chr18:28663827-28664201 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011316	pseudogene	Chr18:31780593-31780967 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011680	pseudogene	Chr18:28238475-28238849 (-)
PWK/PhJ	MGP_PWKPhJ_G0010960	pseudogene	Chr18:27440823-27441197 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010782	pseudogene	Chr18:28449518-28449892 (-)
WSB/EiJ	MGP_WSBEiJ_G0011128	pseudogene	Chr18:28120121-28120495 (-)

Homology

• Gene Tree
  Gm7936
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000055771 (Evidence)
• NCBI Gene
  666114

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000055771	Ensembl Gene Model | MGI Sequence Detail	370	C57BL/6J
transcript	ENSMUST00000069529	Ensembl | MGI Sequence Detail	370	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;