Gm7512 Pseudogene Detail

Summary

• Symbol
  Gm7512
• Name
  predicted gene 7512

• Feature Type
  pseudogene
• IDs
  MGI:3646401
  NCBI Gene: 665138
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  Chr1:9520804-9521973 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, 2.08 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  202 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646401	pseudogene	Chr1:9520733-9522265 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0009990	pseudogene	Chr1:6663463-6664632 (+)
A/J	MGP_AJ_G0009971	pseudogene	Chr1:6758790-6759959 (+)
AKR/J	MGP_AKRJ_G0009955	pseudogene	Chr1:6619743-6620912 (+)
BALB/cJ	MGP_BALBcJ_G0009959	pseudogene	Chr1:6495643-6496812 (+)
C3H/HeJ	MGP_C3HHeJ_G0009890	pseudogene	Chr1:6565996-6567165 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010208	pseudogene	Chr1:6996616-6997785 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0008988	pseudogene	Chr1:5608507-5609672 (+)
CAST/EiJ	MGP_CASTEiJ_G0009742	pseudogene	Chr1:6730406-6731574 (+)
CBA/J	MGP_CBAJ_G0009866	pseudogene	Chr1:7164716-7165885 (+)
DBA/2J	MGP_DBA2J_G0009888	pseudogene	Chr1:6376826-6377995 (+)
FVB/NJ	MGP_FVBNJ_G0009913	pseudogene	Chr1:6302428-6303597 (+)
LP/J	MGP_LPJ_G0009984	pseudogene	Chr1:6887152-6888321 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0009873	pseudogene	Chr1:7768256-7769425 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010184	pseudogene	Chr1:6531528-6532697 (+)
PWK/PhJ	MGP_PWKPhJ_G0009647	pseudogene	Chr1:6221106-6222275 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0009463	pseudogene	Chr1:6703561-6704712 (+)
WSB/EiJ	MGP_WSBEiJ_G0009805	pseudogene	Chr1:6553286-6554455 (+)

Homology

• Gene Tree
  Gm7512
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000102272 (Evidence)
• NCBI Gene
  665138

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000102272	Ensembl Gene Model | MGI Sequence Detail	1170	C57BL/6J
transcript	ENSMUST00000195217	Ensembl | MGI Sequence Detail	1170	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm7512:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr5893	Chr1:9520813-9520819 (+)	12 bp