Gm6382 Pseudogene Detail

Summary

• Symbol
  Gm6382
• Name
  predicted gene 6382

• Feature Type
  pseudogene
• IDs
  MGI:3646438
  NCBI Gene: 623006
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:140993880-140994821 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 63.00 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  85 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646438	pseudogene	ChrX:140993543-140994821 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014882	pseudogene	ChrX:139708192-139709133 (+)
A/J	MGP_AJ_G0014875	pseudogene	ChrX:139110359-139111300 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0014831	pseudogene	ChrX:137341678-137342619 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0015315	pseudogene	ChrX:143727442-143728383 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012958	pseudogene	ChrX:130680178-130681119 (+)
CAST/EiJ	MGP_CASTEiJ_G0014280	pseudogene	ChrX:120524892-120525832 (+)
CBA/J	MGP_CBAJ_G0014656	pseudogene	ChrX:148212636-148213577 (+)
DBA/2J	MGP_DBA2J_G0014739	pseudogene	ChrX:138180446-138181387 (+)
FVB/NJ	MGP_FVBNJ_G0014722	pseudogene	ChrX:137400740-137401681 (+)
LP/J	MGP_LPJ_G0014836	pseudogene	ChrX:140657563-140658504 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014766	pseudogene	ChrX:155826880-155827821 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0015300	pseudogene	ChrX:139018192-139019133 (+)
PWK/PhJ	MGP_PWKPhJ_G0014081	pseudogene	ChrX:117346114-117347174 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013864	pseudogene	ChrX:121048621-121049556 (+)
WSB/EiJ	MGP_WSBEiJ_G0014360	pseudogene	ChrX:137412485-137413426 (+)

Homology

• Gene Tree
  Gm6382
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000082675 (Evidence)
• NCBI Gene
  623006

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082675	Ensembl Gene Model | MGI Sequence Detail	942	C57BL/6J
transcript	ENSMUST00000118873	Ensembl | MGI Sequence Detail	942	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;