Vmn2r-ps158 Gene Detail

Summary

• Symbol
  Vmn2r-ps158
• Name
  vomeronasal 2, receptor, pseudogene 158
• Synonyms
  Gm9268, Vmn2r126

• Feature Type
  protein coding gene
  BioType Conflict
  
• IDs
  MGI:3646456
  NCBI Gene: 668612
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:42668222-42697530 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 28.25 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  100 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646456	protein coding gene	Chr7:42668189-42697530 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• MGI Vertebrate Homology
  Vmn2r-ps158 stringent orthology
  1 mouse;22 zebrafish
  
• Gene Tree
  Vmn2r-ps158
  

Mutations,
Alleles, and
Phenotypes

• Incidental Mutations
  Mutagenetix , APF , CvDC
• Find Mice (IMSR)
  30 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  7
• RefSeq
  1
• UniProt
  1
• CCDS
  CCDS57544.1

• Ensembl
  ENSMUSG00000091528 (Evidence)
• NCBI Gene
  668612

Representative Sequences			Length	Strain/Species
genomic	668612	NCBI Gene Model | MGI Sequence Detail	29309	C57BL/6J
transcript	NR_169589	RefSeq | MGI Sequence Detail	2790	C57BL/6
polypeptide	G3UZC7	UniProt | EBI | MGI Sequence Detail	854	Not Applicable

Protein
Information

• UniProt
  1 Sequence
• InterPro Domains
  IPR000337 GPCR, family 3
  IPR017978 GPCR family 3, C-terminal
  IPR000068 GPCR, family 3, extracellular calcium-sensing receptor-related
  IPR011500 GPCR, family 3, nine cysteines domain
  IPR038550 GPCR, family 3, nine cysteines domain superfamily
  IPR004073 GPCR, family 3, vomeronasal receptor, type 2
  IPR028082 Periplasmic binding protein-like I
  IPR001828 Receptor, ligand binding region

Other
Accession IDs

MGI:6276023, MGI:6451130

References

• Summaries
  All 6
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:155721 Mouse Genome Informatics (MGI) and The National Center for Biotechnology Information (NCBI), Consensus CDS project. Database Download. 2010;