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Samt2 Gene Detail
Summary
  • Symbol
    Samt2
  • Name
    spermatogenesis associated multipass transmembrane protein 2
  • Synonyms
    Gm5647
  • Feature Type
    protein coding gene
  • IDs
    MGI:3646587
    NCBI Gene: 434881
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:153358224-153362326 bp, - strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 72.38 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    214 from dbSNP Build 142
  • Strain Annotations
    12
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3646587
 protein coding gene ChrX:153358224-153362356 (-)
129S1/SvImJ MGP_129S1SvImJ_G0036204
 protein coding gene ChrX:152494170-152502016 (+)
A/J MGP_AJ_G0036179
 protein coding gene ChrX:151681538-151692759 (-)
AKR/J MGP_AKRJ_G0036105
 protein coding gene ChrX:156506698-156510829 (+)
BALB/cJ no annotation
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036694
 protein coding gene ChrX:156876242-156880356 (-)
CAROLI/EiJ no annotation
CAST/EiJ MGP_CASTEiJ_G0035167
 protein coding gene ChrX:131899633-131903225 (-)
CBA/J no annotation
DBA/2J MGP_DBA2J_G0036013
 protein coding gene ChrX:150727697-150731846 (+)
FVB/NJ MGP_FVBNJ_G0035945
 protein coding gene ChrX:149560880-149565052 (-)
LP/J MGP_LPJ_G0036104
 protein coding gene ChrX:153580655-153586195 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0035982
 protein coding gene ChrX:169674128-169674920 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0036727
 protein coding gene ChrX:151713662-151717833 (-)
PWK/PhJ MGP_PWKPhJ_G0034865
 protein coding gene ChrX:129015004-129018028 (+)
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    4
  • GO References
    1
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic 434881 NCBI Gene Model | MGI Sequence Detail 4103 C57BL/6J ±  kb
transcript NM_001037167 RefSeq | MGI Sequence Detail 1011 Not Specified  
polypeptide NP_001032244 RefSeq | MGI Sequence Detail 247 Not Specified  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR006187 Claudin
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1

    Microarray probesets 1
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 1
  • Earliest
    J:344913 Yogo K, et al., Identification of SAMT family proteins as substrates of MARCH11 in mouse spermatids. Histochem Cell Biol. 2012 Jan;137(1):53-65
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory