Cdc5lrt2-ps Pseudogene Detail

Summary

• Symbol
  Cdc5lrt2-ps
• Name
  cell division cycle 5 like, retrotransposed 2, pseudogene
• Synonyms
  Gm9029

• Feature Type
  pseudogene
• IDs
  MGI:3646678
  NCBI Gene: 668186
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:118079705-118082114 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 66.69 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  47 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646678	pseudogene	Chr10:118079388-118082233 (-)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Cdc5lrt2-ps
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Cdc5lrt2-ps
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  5
• RefSeq
  1

• Ensembl
  ENSMUSG00000112135 (Evidence)
• NCBI Gene
  668186

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000112135	Ensembl Gene Model | MGI Sequence Detail	2410	C57BL/6J
transcript	ENSMUST00000219232	Ensembl | MGI Sequence Detail	2410	Not Applicable

Other
Accession IDs

MGI:7444994

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87