Gm9027 Pseudogene Detail

Summary

• Symbol
  Gm9027
• Name
  predicted gene 9027

• Feature Type
  pseudogene
• IDs
  MGI:3646681
  NCBI Gene: 102636734
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr16:61197619-61198279 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 16, 36.14 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  101 from dbSNP Build 142
• Strain Annotations
  14

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646681	pseudogene	Chr16:61197433-61200093 (+)
129S1/SvImJ	no annotation
A/J	MGP_AJ_G0011315	pseudogene	Chr17:20057944-20058660 (+)
AKR/J	MGP_AKRJ_G0011277	pseudogene	Chr17:20117649-20118327 (+)
BALB/cJ	MGP_BALBcJ_G0011290	pseudogene	Chr17:20218246-20218925 (+)
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0014551	pseudogene	Chr9:38215974-38216767 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011190	pseudogene	Chr4:20824318-20824986 (-)
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0011211	pseudogene	Chr17:19706318-19706997 (+)
FVB/NJ	MGP_FVBNJ_G0011211	pseudogene	Chr17:19455958-19456636 (+)
LP/J	MGP_LPJ_G0011300	pseudogene	Chr17:20913148-20913827 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011207	pseudogene	Chr17:22141016-22141694 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011561	pseudogene	Chr17:20435457-20436137 (+)
PWK/PhJ	MGP_PWKPhJ_G0013411	pseudogene	Chr9:35891733-35892469 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013195	pseudogene	Chr9:36979661-36980331 (-)
WSB/EiJ	MGP_WSBEiJ_G0013654	pseudogene	Chr9:36569184-36569850 (-)

Homology

• Gene Tree
  Gm9027
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  18
• RefSeq
  1

• Ensembl
  ENSMUSG00000092029 (Evidence)
• NCBI Gene
  102636734

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000092029	Ensembl Gene Model | MGI Sequence Detail	661	C57BL/6J
transcript	ENSMUST00000165914	Ensembl | MGI Sequence Detail	661	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;