Gm8692 Pseudogene Detail

Summary

• Symbol
  Gm8692
• Name
  predicted gene 8692

• Feature Type
  pseudogene
• IDs
  MGI:3646818
  NCBI Gene: 667537
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:75030784-75031221 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.30 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  107 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3646818	pseudogene	ChrX:75030784-75031221 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014527	pseudogene	ChrX:71853901-71854338 (-)
A/J	MGP_AJ_G0014537	pseudogene	ChrX:72111580-72111993 (-)
AKR/J	MGP_AKRJ_G0013636	pseudogene	Chr6:124332597-124333037 (+)
BALB/cJ	MGP_BALBcJ_G0014490	pseudogene	ChrX:71100450-71100837 (-)
C3H/HeJ	MGP_C3HHeJ_G0014323	pseudogene	ChrX:72367583-72368004 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014966	pseudogene	ChrX:74171206-74171643 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013186	pseudogene	Chr6:124556672-124557109 (+)
CBA/J	MGP_CBAJ_G0014308	pseudogene	ChrX:76137079-76137516 (-)
DBA/2J	MGP_DBA2J_G0014390	pseudogene	ChrX:71547226-71547663 (-)
FVB/NJ	MGP_FVBNJ_G0014380	pseudogene	ChrX:70817066-70817503 (-)
LP/J	MGP_LPJ_G0014485	pseudogene	ChrX:72670983-72671420 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014421	pseudogene	ChrX:78780628-78781065 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014932	pseudogene	ChrX:71708959-71709322 (-)
PWK/PhJ	MGP_PWKPhJ_G0012994	pseudogene	Chr6:118752261-118753305 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012774	pseudogene	Chr6:122358878-122359315 (+)
WSB/EiJ	MGP_WSBEiJ_G0013243	pseudogene	Chr6:124540988-124541428 (+)

Homology

• Gene Tree
  Gm8692
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000082755 (Evidence)
• NCBI Gene
  667537

Representative Sequences			Length	Strain/Species
genomic	667537	NCBI Gene Model | MGI Sequence Detail	438	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8692:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163684	ChrX:75031235-75031244 (-)	-19 bp