Gm7678 Pseudogene Detail

Summary

• Symbol
  Gm7678
• Name
  predicted gene 7678

• Feature Type
  pseudogene
• IDs
  MGI:3647136
  NCBI Gene: 665543
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:22000395-22001334 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 9.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  176 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647136	pseudogene	Chr10:22000395-22001337 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0010499	pseudogene	Chr10:19998675-19999614 (+)
A/J	MGP_AJ_G0010489	pseudogene	Chr10:19244780-19245719 (+)
AKR/J	MGP_AKRJ_G0010455	pseudogene	Chr10:19624381-19625323 (+)
BALB/cJ	MGP_BALBcJ_G0010463	pseudogene	Chr10:19271988-19272927 (+)
C3H/HeJ	MGP_C3HHeJ_G0010394	pseudogene	Chr10:19887750-19888692 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010734	pseudogene	Chr10:20475047-20475989 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0010212	pseudogene	Chr10:19845207-19846149 (+)
CBA/J	MGP_CBAJ_G0010359	pseudogene	Chr10:21424306-21425248 (+)
DBA/2J	MGP_DBA2J_G0010391	pseudogene	Chr10:19099610-19100552 (+)
FVB/NJ	MGP_FVBNJ_G0010414	pseudogene	Chr10:18855061-18856000 (+)
LP/J	MGP_LPJ_G0010481	pseudogene	Chr10:19808678-19809617 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010381	pseudogene	Chr10:21578484-21579423 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010706	pseudogene	Chr10:19555816-19556758 (+)
PWK/PhJ	MGP_PWKPhJ_G0010113	pseudogene	Chr10:19052326-19053265 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0010464	pseudogene	Chr14:11968430-11969372 (-)
WSB/EiJ	MGP_WSBEiJ_G0010282	pseudogene	Chr10:19618788-19619727 (+)

Homology

• Gene Tree
  Gm7678
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  5 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm7678
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000097795 (Evidence)
• NCBI Gene
  665543

Representative Sequences			Length	Strain/Species
genomic	665543	NCBI Gene Model | MGI Sequence Detail	940	C57BL/6J

References

• Summaries
  All 9

  Phenotypes 5
• Earliest
  J:137335 Roderick TH, Chromosomal inversions in studies of mammalian mutagenesis. Genetics. 1979 May;92(1 Pt 1 Suppl):s121-6
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87