Gm9043 Pseudogene Detail

Summary

• Symbol
  Gm9043
• Name
  predicted gene 9043

• Feature Type
  pseudogene
• IDs
  MGI:3647147
  NCBI Gene: 668202
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:94673438-94673972 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 41.99 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  159 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647147	pseudogene	ChrX:94673438-94673972 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040700	pseudogene	ChrX:91968629-91969163 (+)
A/J	MGP_AJ_G0040701	pseudogene	ChrX:92289940-92290540 (-)
AKR/J	MGP_AKRJ_G0040623	pseudogene	ChrX:94604314-94604848 (+)
BALB/cJ	MGP_BALBcJ_G0040690	pseudogene	ChrX:90923089-90923623 (+)
C3H/HeJ	MGP_C3HHeJ_G0040326	pseudogene	ChrX:92497003-92497537 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041393	pseudogene	ChrX:94900160-94900694 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037515	pseudogene	ChrX:90232850-90233391 (+)
CAST/EiJ	MGP_CASTEiJ_G0039367	pseudogene	ChrX:77006394-77006928 (+)
CBA/J	MGP_CBAJ_G0040293	pseudogene	ChrX:97688686-97689220 (+)
DBA/2J	MGP_DBA2J_G0040508	pseudogene	ChrX:91351582-91352116 (+)
FVB/NJ	MGP_FVBNJ_G0040427	pseudogene	ChrX:90783209-90783743 (+)
LP/J	MGP_LPJ_G0040546	pseudogene	ChrX:92976026-92976560 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040430	pseudogene	ChrX:102025407-102025941 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041440	pseudogene	ChrX:91717965-91718499 (+)
PWK/PhJ	MGP_PWKPhJ_G0039015	pseudogene	ChrX:74672535-74673137 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038734	pseudogene	ChrX:77783515-77784056 (+)
WSB/EiJ	MGP_WSBEiJ_G0039610	pseudogene	ChrX:85942076-85942616 (+)

Homology

• Gene Tree
  Gm9043
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083556 (Evidence)
• NCBI Gene
  668202

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083556	Ensembl Gene Model | MGI Sequence Detail	535	C57BL/6J
transcript	ENSMUST00000119677	Ensembl | MGI Sequence Detail	314	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;