Gm4889 Pseudogene Detail

Summary

• Symbol
  Gm4889
• Name
  predicted gene 4889

• Feature Type
  pseudogene
• IDs
  MGI:3647233
  NCBI Gene: 108167567
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr8:34795066-34795508 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 8, 21.16 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  161 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647233	pseudogene	Chr8:34795064-34795508 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0033534	protein coding gene	Chr8:32850789-32851249 (+)
A/J	MGP_AJ_G0033514	protein coding gene	Chr8:31549799-31550243 (+)
AKR/J	MGP_AKRJ_G0033438	protein coding gene	Chr8:32538641-32539085 (+)
BALB/cJ	MGP_BALBcJ_G0033510	protein coding gene	Chr8:31672116-31672560 (+)
C3H/HeJ	MGP_C3HHeJ_G0033222	protein coding gene	Chr8:32880227-32880671 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0034026	protein coding gene	Chr8:34093151-34093594 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0030975	protein coding gene	Chr8:28536100-28536662 (+)
CAST/EiJ	MGP_CASTEiJ_G0032549	protein coding gene	Chr8:32335802-32336277 (+)
CBA/J	MGP_CBAJ_G0033200	protein coding gene	Chr8:35419670-35422337 (+)
DBA/2J	MGP_DBA2J_G0033353	protein coding gene	Chr8:31523962-31524406 (+)
FVB/NJ	MGP_FVBNJ_G0033298	protein coding gene	Chr8:31180518-31180961 (+)
LP/J	MGP_LPJ_G0033443	protein coding gene	Chr8:32819259-32819719 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0033340	protein coding gene	Chr8:34927343-34928921 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0034045	protein coding gene	Chr8:32630514-32630957 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0032665	protein coding gene	Chr8:32803176-32803636 (+)

Homology

• Gene Tree
  Gm4889
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000056797 (Evidence)
• NCBI Gene
  108167567

Representative Sequences			Length	Strain/Species
genomic	108167567	NCBI Gene Model | MGI Sequence Detail	443	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;