Gm5708 Pseudogene Detail

Summary

• Symbol
  Gm5708
• Name
  predicted gene 5708

• Feature Type
  pseudogene
• IDs
  MGI:3647478
  NCBI Gene: 435727
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr3:34237458-34238326 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 3, 16.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  146 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647478	pseudogene	Chr3:34237456-34238341 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012087	pseudogene	Chr3:31834622-31835516 (+)
A/J	MGP_AJ_G0012079	pseudogene	Chr3:31341939-31342833 (+)
AKR/J	MGP_AKRJ_G0012040	pseudogene	Chr3:31874209-31875094 (+)
BALB/cJ	MGP_BALBcJ_G0012055	pseudogene	Chr3:30989034-30989919 (+)
C3H/HeJ	MGP_C3HHeJ_G0011933	pseudogene	Chr3:31919990-31920884 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012362	pseudogene	Chr3:33430468-33431353 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010798	pseudogene	Chr3:29114035-29114906 (+)
CAST/EiJ	MGP_CASTEiJ_G0011717	pseudogene	Chr3:31751147-31752031 (+)
CBA/J	MGP_CBAJ_G0011906	pseudogene	Chr3:34297361-34298255 (+)
DBA/2J	MGP_DBA2J_G0011960	pseudogene	Chr3:30818478-30819363 (+)
FVB/NJ	MGP_FVBNJ_G0011968	pseudogene	Chr3:30267095-30267980 (+)
LP/J	MGP_LPJ_G0012036	pseudogene	Chr3:32614848-32615742 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011970	pseudogene	Chr3:36802640-36803525 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012371	pseudogene	Chr3:31669571-31670465 (+)
PWK/PhJ	MGP_PWKPhJ_G0011561	pseudogene	Chr3:30373260-30374142 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011377	pseudogene	Chr3:31066869-31067760 (+)
WSB/EiJ	MGP_WSBEiJ_G0011739	pseudogene	Chr3:31693716-31694610 (+)

Homology

• Gene Tree
  Gm5708
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Radiation induced
  1
• Genomic Mutations
  1 involving Gm5708
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000105739 (Evidence)
• NCBI Gene
  435727

Representative Sequences			Length	Strain/Species
genomic	435727	NCBI Gene Model | MGI Sequence Detail	869	C57BL/6J

References

• Summaries
  All 6

  Diseases 1

  Phenotypes 2
• Earliest
  J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
• Latest
  J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426