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Gimd1 Gene Detail
Summary
  • Symbol
    Gimd1
  • Name
    GIMAP family P-loop NTPase domain containing 1
  • Synonyms
    Gm5549
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647547
    NCBI Gene: 433653
  • Alliance
    gene page
  • Transcription Start Sites
    4 TSS
Location &
Maps
more
  • Sequence Map
    Chr3:132335581-132351112 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 61.47 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    671 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647547
 protein coding gene Chr3:132335581-132353543 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027891
 protein coding gene Chr3:135403436-135418577 (+)
A/J MGP_AJ_G0027849
 protein coding gene Chr3:130627977-130643284 (+)
AKR/J MGP_AKRJ_G0027814
 protein coding gene Chr3:134028479-134043586 (+)
BALB/cJ MGP_BALBcJ_G0027862
 protein coding gene Chr3:130459226-130474946 (+)
C3H/HeJ MGP_C3HHeJ_G0027591
 protein coding gene Chr3:134431842-134447510 (+)
C57BL/6NJ MGP_C57BL6NJ_G0028305
 protein coding gene Chr3:140155219-140174844 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025643
 protein coding gene Chr3:126073376-126088545 (+)
CAST/EiJ MGP_CASTEiJ_G0027047
 protein coding gene Chr3:134171743-134187445 (+)
CBA/J MGP_CBAJ_G0027567
 protein coding gene Chr3:144894637-144912460 (+)
DBA/2J MGP_DBA2J_G0027707
 protein coding gene Chr3:129799155-129814640 (+)
FVB/NJ MGP_FVBNJ_G0027674
 protein coding gene Chr3:127375108-127390687 (+)
LP/J MGP_LPJ_G0027817
 protein coding gene Chr3:136883872-136900762 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027705
 protein coding gene Chr3:152854945-152875566 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0028363
 protein coding gene Chr3:133703985-133719447 (+)
PWK/PhJ MGP_PWKPhJ_G0026771
 protein coding gene Chr3:129559676-129574996 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026596
 protein coding gene Chr3:131775375-131791681 (+)
WSB/EiJ MGP_WSBEiJ_G0027126
 protein coding gene Chr3:134466325-134482434 (+)



Homology
more
  • Human Ortholog
    GIMD1, GIMAP family P-loop NTPase domain containing 1
  • Vertebrate Orthologs
    2
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    GIMD1, GIMAP family P-loop NTPase domain containing 1
  • Links
    NCBI Gene ID: 100507096
    neXtProt AC: NX_P0DJR0
    UniProt: P0DJR0

  • Chr Location
    chr4:106357392-106368778 (-)  GRCh38
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    5 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091721 Ensembl Gene Model | MGI Sequence Detail 15532 C57BL/6J ±  kb
transcript ENSMUST00000196701 Ensembl | MGI Sequence Detail 654 Not Applicable  
polypeptide ENSMUSP00000142630 Ensembl | MGI Sequence Detail 217 Not Applicable  
For the selected sequence
Protein
Information
less
References
more
  • Summaries
    All 14
    Diseases 1
    Gene Ontology 1
    Phenotypes 5
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory