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Ccdc168 Gene Detail
Summary
  • Symbol
    Ccdc168
  • Name
    coiled-coil domain containing 168
  • Synonyms
    Gm8251
  • Feature Type
    protein coding gene
  • IDs
    MGI:3647616
    NCBI Gene: 102636082
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr1:44095032-44118906 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 1, 23.54 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    550 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3647616
 protein coding gene Chr1:44095031-44118906 (-)
129S1/SvImJ MGP_129S1SvImJ_G0015985
 protein coding gene Chr1:43095586-43101570 (-)
A/J MGP_AJ_G0015969
 protein coding gene Chr1:41757533-41763517 (-)
AKR/J MGP_AKRJ_G0015924
 protein coding gene Chr1:42336671-42342655 (-)
BALB/cJ MGP_BALBcJ_G0015923
 protein coding gene Chr1:41441819-41447803 (-)
C3H/HeJ MGP_C3HHeJ_G0015756
 protein coding gene Chr1:42718166-42724150 (-)
C57BL/6NJ MGP_C57BL6NJ_G0016376
 protein coding gene Chr1:44830785-44836769 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0014098
 protein coding gene Chr1:38599725-38605733 (-)
CAST/EiJ MGP_CASTEiJ_G0015337
 protein coding gene Chr1:42738025-42744009 (-)
CBA/J MGP_CBAJ_G0015728
 protein coding gene Chr1:46130080-46136064 (-)
DBA/2J MGP_DBA2J_G0015829
 protein coding gene Chr1:41063560-41069544 (-)
FVB/NJ MGP_FVBNJ_G0015831
 protein coding gene Chr1:40563254-40569238 (-)
LP/J MGP_LPJ_G0015899
 protein coding gene Chr1:43413404-43419388 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0015851
 protein coding gene Chr1:48109633-48115617 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0016423
 protein coding gene Chr1:42555354-42561338 (-)
PWK/PhJ MGP_PWKPhJ_G0015120
 protein coding gene Chr1:40937442-40943420 (-)
SPRET/EiJ MGP_SPRETEiJ_G0014902
 protein coding gene Chr1:42579790-42585804 (-)
WSB/EiJ MGP_WSBEiJ_G0015399
 protein coding gene Chr1:42601910-42607894 (-)



Homology
more
  • Human Ortholog
    CCDC168, coiled-coil domain containing 168
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    CCDC168, coiled-coil domain containing 168
  • Synonyms
    C13orf40
  • Links
    NCBI Gene ID: 643677
    neXtProt AC: NX_Q8NDH2
    UniProt: Q8NDH2

  • Chr Location
    13q33.1; chr13:102729367-102759072 (-)  GRCh38
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    2 phenotype references
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    28
  • RefSeq
    2
  • UniProt
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000091844 Ensembl Gene Model | MGI Sequence Detail 23875 C57BL/6J ±  kb
transcript ENSMUST00000238662 Ensembl | MGI Sequence Detail 20036 Not Applicable  
polypeptide ENSMUSP00000158837 Ensembl | MGI Sequence Detail 6590 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    2 Sequences
  • InterPro Domains
    IPR031624 Coiled-coil domain-containing protein 168, N-terminal
    IPR053366 Leucine-rich repeat transmembrane protein
  • GlyGen
    A0A571BEV2 6 sites, 6 N-linked glycans (6 sites)
Other
Accession IDs
less
MGI:7444316
References
more
  • Summaries
    All 8
    Phenotypes 2
  • Earliest
    J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
  • Latest
    J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory