Gm6819 Pseudogene Detail

Summary

• Symbol
  Gm6819
• Name
  predicted gene 6819

• Feature Type
  pseudogene
• IDs
  MGI:3647711
  NCBI Gene: 627983
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:38187396-38189286 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 25.36 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  33 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647711	pseudogene	Chr7:38187396-38204620 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040569	pseudogene	Chr7:40645099-40795517 (+)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0040401	pseudogene	Chr7:41054755-41057378 (+)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0041268	pseudogene	Chr7:37416449-37418389 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0039488	pseudogene	Chr7:40676259-40682596 (+)

Homology

• Gene Tree
  Gm6819
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  8

• Ensembl
  ENSMUSG00000099846 (Evidence)
• NCBI Gene
  627983

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000099846	Ensembl Gene Model | MGI Sequence Detail	1891	C57BL/6J
transcript	ENSMUST00000185325	Ensembl | MGI Sequence Detail	1891	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;