Gm5763 Pseudogene Detail

Summary

• Symbol
  Gm5763
• Name
  predicted pseudogene 5763

• Feature Type
  pseudogene
• IDs
  MGI:3647841
  NCBI Gene: 436235
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:141414189-141416132 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 63.48 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  87 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647841	pseudogene	ChrX:141414189-141417011 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012684	pseudogene	Chr4:61664108-61694868 (+)
A/J	MGP_AJ_G0012671	pseudogene	Chr4:59449831-59463837 (+)
AKR/J	MGP_AKRJ_G0012642	pseudogene	Chr4:61097225-61110745 (+)
BALB/cJ	no annotation
C3H/HeJ	MGP_C3HHeJ_G0012514	pseudogene	Chr4:61603441-61621231 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	MGP_CAROLIEiJ_G0011286	pseudogene	Chr4:56782630-56810517 (+)
CAST/EiJ	MGP_CASTEiJ_G0012270	pseudogene	Chr4:59527967-59556017 (+)
CBA/J	no annotation
DBA/2J	MGP_DBA2J_G0012552	pseudogene	Chr4:59307682-59320388 (+)
FVB/NJ	MGP_FVBNJ_G0012553	pseudogene	Chr4:58562800-58579535 (+)
LP/J	MGP_LPJ_G0012624	pseudogene	Chr4:61932656-61964526 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012560	pseudogene	Chr4:69125759-69139876 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012986	pseudogene	Chr4:61197156-61210767 (+)
PWK/PhJ	MGP_PWKPhJ_G0012096	pseudogene	Chr4:57780273-57808296 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011910	pseudogene	Chr4:58627698-58655392 (+)
WSB/EiJ	MGP_WSBEiJ_G0012292	pseudogene	Chr4:61166512-61194327 (+)

Homology

• Gene Tree
  Gm5763
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000048600 (Evidence)
• NCBI Gene
  436235

Representative Sequences			Length	Strain/Species
genomic	436235	NCBI Gene Model | MGI Sequence Detail	1944	C57BL/6J

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;