Mark4-ps Pseudogene Detail

Summary

• Symbol
  Mark4-ps
• Name
  MAP/microtubule affinity regulating kinase 4, pseudogene
• Synonyms
  Gm9221

• Feature Type
  pseudogene
• IDs
  MGI:3647884
  NCBI Gene: 668523
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr17:54218964-54219347 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 28.03 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  276 from dbSNP Build 142
• Strain Annotations
  15

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647884	pseudogene	Chr17:54199009-54219984 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011376	pseudogene	Chr17:55343534-55343917 (+)
A/J	MGP_AJ_G0011372	pseudogene	Chr17:53997681-53998064 (-)
AKR/J	MGP_AKRJ_G0011337	pseudogene	Chr17:54627370-54627753 (-)
BALB/cJ	MGP_BALBcJ_G0011350	pseudogene	Chr17:53677398-53678723 (+)
C3H/HeJ	MGP_C3HHeJ_G0011234	pseudogene	Chr17:55108408-55108791 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0010867	pseudogene	Chr11:19979681-19980064 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0011045	pseudogene	Chr17:55447841-55448224 (+)
CBA/J	MGP_CBAJ_G0011218	pseudogene	Chr17:59801506-59801889 (-)
DBA/2J	MGP_DBA2J_G0010517	pseudogene	Chr11:18377673-18378056 (-)
FVB/NJ	MGP_FVBNJ_G0011270	pseudogene	Chr17:52337994-52338368 (-)
LP/J	MGP_LPJ_G0011341	pseudogene	Chr17:56179066-56179449 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011264	pseudogene	Chr17:59250824-59251198 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011621	pseudogene	Chr17:54943504-54981264 (-)
PWK/PhJ	no annotation
SPRET/EiJ	MGP_SPRETEiJ_G0010045	pseudogene	Chr11:18907939-18908322 (-)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Mark4-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  19
• RefSeq
  1

• Ensembl
  ENSMUSG00000105921 (Evidence)
• NCBI Gene
  668523

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000105921	Ensembl Gene Model | MGI Sequence Detail	384	C57BL/6J
transcript	ENSMUST00000196140	Ensembl | MGI Sequence Detail	384	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;