Gm6963 Pseudogene Detail

Summary

• Symbol
  Gm6963
• Name
  predicted gene 6963

• Feature Type
  pseudogene
• IDs
  MGI:3647921
  NCBI Gene: 629337
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr10:39300614-39300992 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 10, 20.59 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  179 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3647921	pseudogene	Chr10:39300614-39300992 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010508	pseudogene	Chr10:37928275-37928653 (-)
A/J	MGP_AJ_G0010502	pseudogene	Chr10:36919414-36919792 (-)
AKR/J	MGP_AKRJ_G0010465	pseudogene	Chr10:37432518-37432896 (-)
BALB/cJ	MGP_BALBcJ_G0010475	pseudogene	Chr10:36965138-36965516 (-)
C3H/HeJ	MGP_C3HHeJ_G0010403	pseudogene	Chr10:37755982-37756360 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0010746	pseudogene	Chr10:39096581-39096959 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009415	pseudogene	Chr10:34913978-34914356 (-)
CAST/EiJ	MGP_CASTEiJ_G0010218	pseudogene	Chr10:37910997-37911375 (-)
CBA/J	MGP_CBAJ_G0010369	pseudogene	Chr10:40908453-40908831 (-)
DBA/2J	MGP_DBA2J_G0010402	pseudogene	Chr10:36442721-36443099 (-)
FVB/NJ	MGP_FVBNJ_G0010421	pseudogene	Chr10:35945972-35946350 (-)
LP/J	MGP_LPJ_G0010491	pseudogene	Chr10:37897511-37897889 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010388	pseudogene	Chr10:41767017-41767395 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0010712	pseudogene	Chr10:37419521-37419899 (-)
PWK/PhJ	MGP_PWKPhJ_G0010122	pseudogene	Chr10:36278583-36278961 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0009935	pseudogene	Chr10:37202836-37203214 (-)
WSB/EiJ	MGP_WSBEiJ_G0010289	pseudogene	Chr10:37693123-37693501 (-)

Homology

• Gene Tree
  Gm6963
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  6 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm6963
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000085799 (Evidence)
• NCBI Gene
  629337

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000085799	Ensembl Gene Model | MGI Sequence Detail	379	C57BL/6J
transcript	ENSMUST00000147879	Ensembl | MGI Sequence Detail	379	Not Applicable

References

• Summaries
  All 10

  Phenotypes 6
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
• Latest
  J:74548 Benson KF, et al., Molecular Characterization of the Mouse In(10)17Rk Inversion and Identification of a Novel Muscle-Specific Gene at the Proximal Breakpoint. Genetics. 2002 Jan;160(1):279-87