Gm5656 Pseudogene Detail

Summary

• Symbol
  Gm5656
• Name
  predicted gene 5656

• Feature Type
  pseudogene
• IDs
  MGI:3648024
  NCBI Gene: 435316
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr12:103668530-103670857 bp, - strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 12, 52.98 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  230 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648024	pseudogene	Chr12:103665787-103670878 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0040005	pseudogene	Chr12:105394800-105399879 (-)
A/J	MGP_AJ_G0040014	pseudogene	Chr12:101352638-101357705 (-)
AKR/J	MGP_AKRJ_G0039933	pseudogene	Chr12:104194442-104199519 (-)
BALB/cJ	MGP_BALBcJ_G0039993	pseudogene	Chr12:101694061-101699138 (-)
C3H/HeJ	MGP_C3HHeJ_G0039641	pseudogene	Chr12:104702131-104707170 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0040572	pseudogene	Chr12:108666370-108671355 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037122	pseudogene	Chr12:98346010-98351114 (-)
CAST/EiJ	MGP_CASTEiJ_G0038749	pseudogene	Chr12:99520968-99524829 (-)
CBA/J	MGP_CBAJ_G0039607	pseudogene	Chr12:112712658-112717735 (-)
DBA/2J	MGP_DBA2J_G0039803	pseudogene	Chr12:100865354-100870431 (-)
FVB/NJ	MGP_FVBNJ_G0039769	pseudogene	Chr12:99594741-99599820 (-)
LP/J	MGP_LPJ_G0039841	pseudogene	Chr12:105261031-105266110 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0039752	pseudogene	Chr12:116159410-116164487 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0040666	pseudogene	Chr12:103718570-103724777 (-)
PWK/PhJ	MGP_PWKPhJ_G0038426	pseudogene	Chr12:95402229-95407331 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0038152	pseudogene	Chr12:97937221-97942318 (-)
WSB/EiJ	MGP_WSBEiJ_G0038969	pseudogene	Chr12:104632865-104637958 (-)

Homology

• Gene Tree
  Gm5656
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  2 phenotype references
  

• All Mutations and Alleles
  1
• Chemically induced (other)
  1
• Genomic Mutations
  1 involving Gm5656
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000090478 (Evidence)
• NCBI Gene
  435316

Representative Sequences			Length	Strain/Species
genomic	435316	NCBI Gene Model | MGI Sequence Detail	2328	C57BL/6J

References

• Summaries
  All 6

  Phenotypes 2
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;