Gm6934 Gene Detail

Summary

• Symbol
  Gm6934
• Name
  predicted gene 6934

• Feature Type
  protein coding gene
• IDs
  MGI:3648115
  NCBI Gene: 628919
• Alliance
  gene page
• Transcription Start Sites
  7 TSS

Location &
Maps

• Sequence Map
  Chr17:52139847-52141751 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 17, 26.96 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648115	protein coding gene	Chr17:52139847-52141751 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000944	unclassified gene	Chr17:53314381-53316248 (+)
A/J	MGP_AJ_G0000920	unclassified gene	Chr17:51858866-51860770 (+)
AKR/J	MGP_AKRJ_G0000908	unclassified gene	Chr17:52466766-52468670 (+)
BALB/cJ	MGP_BALBcJ_G0000913	unclassified gene	Chr17:51762740-51764644 (+)
C3H/HeJ	MGP_C3HHeJ_G0000896	unclassified gene	Chr17:53166925-53169831 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0001029	unclassified gene	Chr17:55419357-55421261 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000760	unclassified gene	Chr17:48570797-48572681 (+)
CAST/EiJ	MGP_CASTEiJ_G0000888	unclassified gene	Chr17:53458824-53460695 (+)
CBA/J	MGP_CBAJ_G0000888	unclassified gene	Chr17:57503401-57505305 (+)
DBA/2J	MGP_DBA2J_G0000892	unclassified gene	Chr17:50643934-50645838 (+)
FVB/NJ	MGP_FVBNJ_G0000904	unclassified gene	Chr17:50295401-50297325 (+)
LP/J	MGP_LPJ_G0000947	unclassified gene	Chr17:54033852-54035738 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000895	unclassified gene	Chr17:56926232-56928136 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0001022	unclassified gene	Chr17:52766088-52767960 (+)
PWK/PhJ	MGP_PWKPhJ_G0000842	unclassified gene	Chr17:50092461-50094576 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000815	unclassified gene	Chr17:49746359-49749652 (+)
WSB/EiJ	MGP_WSBEiJ_G0000896	unclassified gene	Chr17:53388792-53390667 (+)

Homology

• Gene Tree
  Gm6934
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  2

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  1

• Ensembl
  ENSMUSG00000103753 (Evidence)
• NCBI Gene
  628919

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000103753	Ensembl Gene Model | MGI Sequence Detail	1905	C57BL/6J
transcript	NR_188923	RefSeq | MGI Sequence Detail	1126	C57BL/6

Molecular
Reagents

• All nucleic 2

  cDNA 2

References

• Summaries
  All 7
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:57747 MGI Genome Annotation Group and UniGene Staff, MGI-UniGene Interconnection Effort. Database Download. 2015;

TSS for Gm6934:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr145166	Chr17:52139785-52139805 (+)	-52 bp
Tssr145167	Chr17:52139806-52139828 (+)	-30 bp
Tssr145168	Chr17:52139843-52139853 (+)	1 bp
Tssr145169	Chr17:52140035-52140045 (+)	193 bp
Tssr145170	Chr17:52140048-52140065 (+)	210 bp
Tssr145171	Chr17:52140270-52140289 (+)	433 bp
Tssr145172	Chr17:52141490-52141499 (+)	1,648 bp