Gm16410 Pseudogene Detail

Summary

• Symbol
  Gm16410
• Name
  predicted gene 16410

• Feature Type
  pseudogene
• IDs
  MGI:3648382
  NCBI Gene: 674122
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:133390119-133390892 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 56.18 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  163 from dbSNP Build 142
• Strain Annotations
  5

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648382	pseudogene	ChrX:133389671-133391761 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013205	pseudogene	Chr5:106410223-106470576 (-)
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	MGP_C57BL6NJ_G0015261	pseudogene	ChrX:135548801-135550537 (+)
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	MGP_LPJ_G0013138	pseudogene	Chr5:107031062-107100355 (-)
NOD/ShiLtJ	no annotation
NZO/HlLtJ	MGP_NZOHlLtJ_G0015236	pseudogene	ChrX:131094860-131097574 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm16410
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  9
• RefSeq
  1

• Ensembl
  ENSMUSG00000070641 (Evidence)
• NCBI Gene
  674122

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000070641	Ensembl Gene Model | MGI Sequence Detail	774	C57BL/6J
transcript	ENSMUST00000094550	Ensembl | MGI Sequence Detail	774	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;