Gm6855 Pseudogene Detail

Summary

• Symbol
  Gm6855
• Name
  predicted gene 6855

• Feature Type
  pseudogene
• IDs
  MGI:3648447
  NCBI Gene: 628211
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:4641535-4642324 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 2.68 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  94 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648447	pseudogene	Chr7:4641516-4642368 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013796	pseudogene	Chr7:1558310-1559020 (+)
A/J	MGP_AJ_G0013792	pseudogene	Chr7:1572490-1573227 (+)
AKR/J	no annotation
BALB/cJ	MGP_BALBcJ_G0013774	pseudogene	Chr7:1614488-1615270 (+)
C3H/HeJ	MGP_C3HHeJ_G0013600	pseudogene	Chr7:1609540-1611967 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0014167	pseudogene	Chr7:1618988-1619720 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0012104	pseudogene	Chr7:1323439-1324233 (+)
CAST/EiJ	MGP_CASTEiJ_G0013282	pseudogene	Chr7:1546195-1549775 (+)
CBA/J	MGP_CBAJ_G0013577	pseudogene	Chr7:1807215-1808004 (+)
DBA/2J	MGP_DBA2J_G0013658	pseudogene	Chr7:1547496-1553703 (+)
FVB/NJ	MGP_FVBNJ_G0013657	pseudogene	Chr7:1517782-1518571 (+)
LP/J	MGP_LPJ_G0013739	pseudogene	Chr7:1672724-1673449 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0013672	pseudogene	Chr7:1744343-1746576 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014148	pseudogene	Chr7:1546087-1547832 (+)
PWK/PhJ	MGP_PWKPhJ_G0013095	pseudogene	Chr7:1718873-1719753 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012873	pseudogene	Chr7:1597604-1598405 (+)
WSB/EiJ	no annotation

Homology

• Gene Tree
  Gm6855
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  21
• RefSeq
  2

• Ensembl
  ENSMUSG00000108571 (Evidence)
• NCBI Gene
  628211

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000108571	Ensembl Gene Model | MGI Sequence Detail	790	C57BL/6J
transcript	ENSMUST00000206307	Ensembl | MGI Sequence Detail	790	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;