Frg2f8 Pseudogene Detail

Summary

• Symbol
  Frg2f8
• Name
  FSHD region gene 2 family member 8
• Synonyms
  Gm6280

• Feature Type
  pseudogene
• IDs
  MGI:3648470
  NCBI Gene: 622052
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr14:111208040-111209122 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 14, 57.20 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  178 from dbSNP Build 142
• Strain Annotations
  1

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648470	pseudogene	Chr14:111208040-111209122 (+)
129S1/SvImJ	no annotation
A/J	no annotation
AKR/J	no annotation
BALB/cJ	no annotation
C3H/HeJ	no annotation
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	no annotation
DBA/2J	no annotation
FVB/NJ	no annotation
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	no annotation

Homology

• Human Ortholog
  FRG2, FSHD region gene 2

• Vertebrate Orthologs
  2

Vertebrate Orthology Source

Alliance of Genome Resources

• Human Ortholog
  FRG2, FSHD region gene 2
  
• Synonyms
  FRG2A
• Links
  HGNC:19136

  NCBI Gene ID: 448831

  neXtProt AC: NX_Q64ET8

  UniProt: Q64ET8

  
  
• Chr Location
  4q35.2; chr4:190024367-190027257 (-)  GRCh38

---

• Human Ortholog
  FRG2B, FSHD region gene 2 family member B
  
• Links
  HGNC:33518

  NCBI Gene ID: 441581

  neXtProt AC: NX_Q96QU4

  UniProt: Q96QU4

  
  
• Chr Location
  10q26.3; chr10:133623895-133626795 (-)  GRCh38

---

• MGI Vertebrate Homology
  Frg2f8 stringent orthology
  2 human;1 mouse
  
• HCOP
  vertebrate homology predictions: FRG2, FRG2B

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Frg2f8
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Other Mouse Links
  GEO

Sequences &
Gene Models

• All Sequences
  3
• RefSeq
  1

• NCBI Gene
  622052

Representative Sequences			Length	Strain/Species
genomic	622052	NCBI Gene Model | MGI Sequence Detail	1083	C57BL/6J

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 9

  Phenotypes 4
• Earliest
  J:67314 Roix J, et al., Molecular and functional mapping of the piebald deletion complex on mouse chromosome 14. Genetics. 2001 Feb;157(2):803-15