Gm7340 Pseudogene Detail

Summary

• Symbol
  Gm7340
• Name
  predicted gene 7340

• Feature Type
  pseudogene
• IDs
  MGI:3648496
  NCBI Gene: 664791
• Alliance
  gene page

Location &
Maps

• Sequence Map
  ChrX:110481396-110484147 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 48.29 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  104 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648496	pseudogene	ChrX:110481332-110484168 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0014733	pseudogene	ChrX:108299909-108303151 (+)
A/J	MGP_AJ_G0014737	pseudogene	ChrX:108186285-108189203 (+)
AKR/J	MGP_AKRJ_G0014669	pseudogene	ChrX:111532288-111535928 (+)
BALB/cJ	MGP_BALBcJ_G0014679	pseudogene	ChrX:103826492-106818083 (+)
C3H/HeJ	MGP_C3HHeJ_G0014519	pseudogene	ChrX:108754937-108758233 (+)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0014139	pseudogene	ChrX:92681966-92684717 (+)
CBA/J	MGP_CBAJ_G0014511	pseudogene	ChrX:114984289-114986532 (+)
DBA/2J	MGP_DBA2J_G0014595	pseudogene	ChrX:107322872-107325323 (+)
FVB/NJ	MGP_FVBNJ_G0014574	pseudogene	ChrX:106705224-106709231 (+)
LP/J	no annotation
NOD/ShiLtJ	no annotation
NZO/HlLtJ	no annotation
PWK/PhJ	MGP_PWKPhJ_G0013941	pseudogene	ChrX:90194561-90197276 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0013740	pseudogene	ChrX:93530987-93538632 (+)
WSB/EiJ	MGP_WSBEiJ_G0014219	pseudogene	ChrX:106663525-106670598 (+)

Homology

• Gene Tree
  Gm7340
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000083898 (Evidence)
• NCBI Gene
  664791

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083898	Ensembl Gene Model | MGI Sequence Detail	2752	C57BL/6J
transcript	ENSMUST00000119729	Ensembl | MGI Sequence Detail	2752	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;