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Ndufs6b Pseudogene Detail
Summary
  • Symbol
    Ndufs6b
  • Name
    NADH:ubiquinone oxidoreductase subunit S6B
  • Synonyms
    Gm6415
Location &
Maps
more
  • Sequence Map
    Chr7:80811145-80811492 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 7, 45.71 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    165 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648526
 pseudogene Chr7:80811021-80811494 (-)
129S1/SvImJ MGP_129S1SvImJ_G0013945
 pseudogene Chr7:83196148-83196495 (-)
A/J MGP_AJ_G0013964
 pseudogene Chr7:81241215-81241562 (-)
AKR/J MGP_AKRJ_G0013898
 pseudogene Chr7:83029195-83029542 (-)
BALB/cJ MGP_BALBcJ_G0013921
 pseudogene Chr7:80894726-80895073 (-)
C3H/HeJ MGP_C3HHeJ_G0013756
 pseudogene Chr7:83649111-83649458 (-)
C57BL/6NJ MGP_C57BL6NJ_G0014354
 pseudogene Chr7:86459725-86460072 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0012203
 pseudogene Chr7:83727219-83727566 (-)
CAST/EiJ MGP_CASTEiJ_G0013413
 pseudogene Chr7:74561374-74561721 (-)
CBA/J MGP_CBAJ_G0013735
 pseudogene Chr7:89349426-89349773 (-)
DBA/2J MGP_DBA2J_G0013814
 pseudogene Chr7:79777194-79777541 (-)
FVB/NJ MGP_FVBNJ_G0013817
 pseudogene Chr7:79706018-79706365 (-)
LP/J MGP_LPJ_G0013889
 pseudogene Chr7:84431013-84431360 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0013843
 pseudogene Chr7:89433917-89434264 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0014314
 pseudogene Chr7:82444478-82444825 (-)
PWK/PhJ MGP_PWKPhJ_G0013229
 pseudogene Chr7:72983666-72984013 (-)
SPRET/EiJ MGP_SPRETEiJ_G0012992
 pseudogene Chr7:69451275-69451620 (-)
WSB/EiJ MGP_WSBEiJ_G0013476
 pseudogene Chr7:82803838-82804185 (-)



Homology
more
  • Human Ortholog
    NDUFS6, NADH:ubiquinone oxidoreductase subunit S6
  • Vertebrate Orthologs
    1
Vertebrate Orthology Source
Alliance of Genome Resources
  • Human Ortholog
    NDUFS6, NADH:ubiquinone oxidoreductase subunit S6
  • Synonyms
    CI-13kA, CI-13kD-A, CI13KDA, MC1DN9
  • Links
    NCBI Gene ID: 4726
    neXtProt AC: NX_O75380
    UniProt: O75380

  • Chr Location
    5p15.33; chr5:1801407-1816048 (+)  GRCh38
Human Diseases
more
  • Diseases
    2 with human NDUFS6 associations

Human Disease Mouse Models
      
IDs
IDs
Click on a disease name to see all genes associated with that disease.

Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    11 phenotype references
  • All Mutations and Alleles
    3
  • Chemically induced (other)
    1
  • Radiation induced
    2
  • Genomic Mutations
    3 involving Ndufs6b
  • Find Mice (IMSR)
    0 strains or lines available
Gene Ontology
(GO)
Classifications
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  • All GO Annotations
    2
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
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Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
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  • All Sequences
    23
  • RefSeq
    2
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000083820 Ensembl Gene Model | MGI Sequence Detail 348 C57BL/6J ±  kb
transcript ENSMUST00000118488 Ensembl | MGI Sequence Detail 348 Not Applicable  
polypeptide XP_036009552 RefSeq | MGI Sequence Detail 116 C57BL/6J  
For the selected sequence
Other
Accession IDs
less
MGI:6154850
References
more
  • Summaries
    All 16
    Gene Ontology 1
    Phenotypes 11
  • Earliest
    J:88307 Giometti CS, et al., The analysis of recessive lethal mutations in mice by using two-dimensional gel electrophoresis of liver proteins. Mutat Res. 1990 Sep;242(1):47-55
  • Latest
    J:123187 Cohen-Barak O, et al., Stem cell transplantation demonstrates that Sox6 represses epsilon y globin expression in definitive erythropoiesis of adult mice. Exp Hematol. 2007 Mar;35(3):358-67
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/12/2024
MGI 6.24 		The Jackson Laboratory