Gm8974 Pseudogene Detail

Summary

• Symbol
  Gm8974
• Name
  predicted gene 8974

• Feature Type
  pseudogene
• IDs
  MGI:3648532
  NCBI Gene: 115489040
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr19:46193819-46194297 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 19, 38.75 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  99 from dbSNP Build 142
• Strain Annotations
  13

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648532	pseudogene	Chr19:46193605-46194344 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011496	pseudogene	Chr19:45880066-45880542 (-)
A/J	MGP_AJ_G0011491	pseudogene	Chr19:43622876-43623352 (-)
AKR/J	MGP_AKRJ_G0011456	pseudogene	Chr19:45027580-45028056 (-)
BALB/cJ	MGP_BALBcJ_G0011472	pseudogene	Chr19:43677661-43678244 (-)
C3H/HeJ	MGP_C3HHeJ_G0011359	pseudogene	Chr19:45204445-45204921 (-)
C57BL/6NJ	no annotation
CAROLI/EiJ	no annotation
CAST/EiJ	no annotation
CBA/J	MGP_CBAJ_G0011328	pseudogene	Chr19:49384227-49384703 (-)
DBA/2J	MGP_DBA2J_G0011385	pseudogene	Chr19:43444256-43444732 (-)
FVB/NJ	MGP_FVBNJ_G0011390	pseudogene	Chr19:43217574-43218050 (-)
LP/J	MGP_LPJ_G0011130	pseudogene	Chr14:116786204-116787307 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011386	pseudogene	Chr19:48729962-48731065 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011749	pseudogene	Chr19:45141390-45143137 (-)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0010882	pseudogene	Chr14:115218419-115218898 (-)

Homology

• Gene Tree
  Gm8974
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  17
• RefSeq
  1

• Ensembl
  ENSMUSG00000093525 (Evidence)
• NCBI Gene
  115489040

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000093525	Ensembl Gene Model | MGI Sequence Detail	479	C57BL/6J
transcript	ENSMUST00000175770	Ensembl | MGI Sequence Detail	479	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;