Gm8973 Pseudogene Detail

Summary

• Symbol
  Gm8973
• Name
  predicted gene 8973

• Feature Type
  pseudogene
• IDs
  MGI:3648534
  NCBI Gene: 668092
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr15:98903938-98904250 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 15, 55.52 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  143 from dbSNP Build 142
• Strain Annotations
  16

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648534	pseudogene	Chr15:98903920-98904258 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0022318	protein coding gene	Chr15:100789520-100789834 (+)
A/J	MGP_AJ_G0022276	protein coding gene	Chr15:96798649-96798963 (+)
AKR/J	MGP_AKRJ_G0022252	protein coding gene	Chr15:99785324-99785638 (+)
BALB/cJ	MGP_BALBcJ_G0022283	protein coding gene	Chr15:96995223-96995537 (+)
C3H/HeJ	MGP_C3HHeJ_G0022051	protein coding gene	Chr15:99834665-99834979 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0022728	protein coding gene	Chr15:104544310-104544624 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0020254	protein coding gene	Chr15:92716306-92716570 (+)
CAST/EiJ	MGP_CASTEiJ_G0021574	protein coding gene	Chr15:100693407-100693721 (+)
CBA/J	MGP_CBAJ_G0022020	protein coding gene	Chr15:108094977-108095291 (+)
DBA/2J	MGP_DBA2J_G0022147	protein coding gene	Chr15:96247354-96247668 (+)
FVB/NJ	MGP_FVBNJ_G0022126	protein coding gene	Chr15:95231545-95231859 (+)
LP/J	MGP_LPJ_G0022218	protein coding gene	Chr15:100932531-100932845 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0022147	protein coding gene	Chr15:112071057-112071371 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0022743	protein coding gene	Chr15:99867989-99868303 (+)
PWK/PhJ	no annotation
SPRET/EiJ	no annotation
WSB/EiJ	MGP_WSBEiJ_G0021626	protein coding gene	Chr15:100410669-100410983 (+)

Homology

• Gene Tree
  Gm8973
  

Human Diseases

• References
  1 with disease annotations

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  20 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  1
• Radiation induced
  2
• Genomic Mutations
  3 involving Gm8973
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20
• RefSeq
  1

• Ensembl
  ENSMUSG00000064081 (Evidence)
• NCBI Gene
  668092

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000064081	Ensembl Gene Model | MGI Sequence Detail	313	C57BL/6J
transcript	ENSMUST00000079818	Ensembl | MGI Sequence Detail	313	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 25

  Diseases 1

  Phenotypes 20
• Earliest
  J:7688 Lane PW, et al., Association of megacolon with a new dominant spotting gene (Dom) in the mouse. J Hered. 1984 Nov-Dec;75(6):435-9
• Latest
  J:285676 Suzuki A, et al., Genes and microRNAs associated with mouse cleft palate: A systematic review and bioinformatics analysis. Mech Dev. 2018 Apr;150:21-27