Gm8666 Pseudogene Detail

Summary

• Symbol
  Gm8666
• Name
  predicted gene 8666

• Feature Type
  pseudogene
• IDs
  MGI:3648747
  NCBI Gene: 101055894
• Alliance
  gene page
• Transcription Start Sites
  1 TSS

Location &
Maps

• Sequence Map
  ChrX:74518838-74519129 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome X, 38.24 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  58 from dbSNP Build 142
• Strain Annotations
  17

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648747	pseudogene	ChrX:74518686-74519231 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0014525	pseudogene	ChrX:71322375-71322666 (-)
A/J	MGP_AJ_G0014535	pseudogene	ChrX:71539485-71539776 (-)
AKR/J	MGP_AKRJ_G0014462	pseudogene	ChrX:73390183-73390474 (-)
BALB/cJ	MGP_BALBcJ_G0014488	pseudogene	ChrX:70547299-70547587 (-)
C3H/HeJ	MGP_C3HHeJ_G0014321	pseudogene	ChrX:71824225-71824516 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0014958	pseudogene	ChrX:73619038-73619323 (-)
CAROLI/EiJ	no annotation
CAST/EiJ	MGP_CASTEiJ_G0013953	pseudogene	ChrX:57144097-57144388 (-)
CBA/J	MGP_CBAJ_G0014306	pseudogene	ChrX:75573005-75573283 (-)
DBA/2J	MGP_DBA2J_G0014388	pseudogene	ChrX:70994032-70994323 (-)
FVB/NJ	MGP_FVBNJ_G0014378	pseudogene	ChrX:70318670-70318961 (-)
LP/J	MGP_LPJ_G0014483	pseudogene	ChrX:72123871-72124162 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0014419	pseudogene	ChrX:78189012-78189409 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0014930	pseudogene	ChrX:71192325-71192616 (-)
PWK/PhJ	MGP_PWKPhJ_G0013757	pseudogene	ChrX:55155910-55156201 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0013559	pseudogene	ChrX:57963867-57964158 (-)
WSB/EiJ	MGP_WSBEiJ_G0014027	pseudogene	ChrX:70395879-70396170 (-)

Homology

• Gene Tree
  Gm8666
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000048709 (Evidence)
• NCBI Gene
  101055894

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000048709	Ensembl Gene Model | MGI Sequence Detail	292	C57BL/6J
transcript	ENSMUST00000117517	Ensembl | MGI Sequence Detail	292	Not Applicable

References

• Summaries
  All 4
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;

TSS for Gm8666:

(View these features in JBrowse)

Transcription Start Site	Location	Distance from Gene 5'-end
Tssr163667	ChrX:74519235-74519269 (-)	-123 bp