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Gm6525 Gene Detail
Summary
  • Symbol
    Gm6525
  • Name
    predicted pseudogene 6525
Location &
Maps
more
  • Sequence Map
    Chr3:84081945-84082500 bp, + strand
    From NCBI annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 3, 37.49 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    150 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648757
 protein coding gene Chr3:84081411-84082500 (+)
129S1/SvImJ MGP_129S1SvImJ_G0027341
 protein coding gene Chr3:84073284-84074311 (+)
A/J MGP_AJ_G0027305
 protein coding gene Chr3:81285055-81286084 (+)
AKR/J MGP_AKRJ_G0027271
 protein coding gene Chr3:83201405-83202432 (+)
BALB/cJ MGP_BALBcJ_G0027314
 protein coding gene Chr3:81357504-81358531 (+)
C3H/HeJ MGP_C3HHeJ_G0027058
 protein coding gene Chr3:83516512-83517540 (+)
C57BL/6NJ MGP_C57BL6NJ_G0027760
 protein coding gene Chr3:87210905-87211933 (+)
CAROLI/EiJ MGP_CAROLIEiJ_G0025113
 protein coding gene Chr3:76955968-76957181 (+)
CAST/EiJ MGP_CASTEiJ_G0026505
 protein coding gene Chr3:83686666-83687687 (+)
CBA/J MGP_CBAJ_G0027033
 protein coding gene Chr3:90142715-90143743 (+)
DBA/2J MGP_DBA2J_G0027169
 protein coding gene Chr3:80806050-80807077 (+)
FVB/NJ MGP_FVBNJ_G0027137
 protein coding gene Chr3:79088066-79089093 (+)
LP/J MGP_LPJ_G0027277
 protein coding gene Chr3:85049089-85050116 (+)
NOD/ShiLtJ MGP_NODShiLtJ_G0027156
 protein coding gene Chr3:96508835-96509862 (+)
NZO/HlLtJ MGP_NZOHlLtJ_G0027818
 protein coding gene Chr3:83000544-83001571 (+)
PWK/PhJ MGP_PWKPhJ_G0026239
 protein coding gene Chr3:80571047-80572063 (+)
SPRET/EiJ MGP_SPRETEiJ_G0026055
 protein coding gene Chr3:82174792-82176131 (+)
WSB/EiJ MGP_WSBEiJ_G0026583
 protein coding gene Chr3:83354494-83355521 (+)



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    4 phenotype references
  • All Mutations and Alleles
    2
  • Chemically induced (other)
    1
  • Radiation induced
    1
  • Genomic Mutations
    2 involving Gm6525
  • Find Mice (IMSR)
    5 strains or lines available
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    1
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
  • cDNA Data
    1
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic 624713 NCBI Gene Model | MGI Sequence Detail 556 C57BL/6J ±  kb
transcript NR_036654 RefSeq | MGI Sequence Detail 556 C57BL/6  
polypeptide A0A0A6YW33 UniProt | EBI | MGI Sequence Detail 106 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR053708 Eukaryotic Ribosomal Large Subunit eL42
    IPR000552 Large ribosomal subunit protein eL42
    IPR011332 Zinc-binding ribosomal protein
Molecular
Reagents
less
  • All nucleic 1
    cDNA 1
References
more
  • Summaries
    All 11
    Diseases 1
    Gene Ontology 1
    Phenotypes 4
  • Earliest
    J:70677 Cook SA, et al., Mouse paracentric inversion In(3)55Rk mutates the urate oxidase gene. Cytogenet Cell Genet. 2001;93(1-2):77-82
  • Latest
    J:302829 Lu J, et al., Mouse models for human hyperuricaemia: a critical review. Nat Rev Rheumatol. 2019 Jul;15(7):413-426
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory