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Rhox2d Gene Detail
Summary
  • Symbol
    Rhox2d
  • Name
    reproductive homeobox 2D
  • Synonyms
    EG434760
  • Feature Type
    protein coding gene
  • IDs
    MGI:3648779
    NCBI Gene: 434760
  • Member of
    Rhox cluster
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    ChrX:36675081-36679276 bp, + strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome X, 21.79 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    247 from dbSNP Build 142
  • Strain Annotations
    9
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648779
 protein coding gene ChrX:36675063-36679368 (+)
129S1/SvImJ MGP_129S1SvImJ_G0035647
 protein coding gene ChrX:32648461-32652605 (-)
A/J MGP_AJ_G0035634
 protein coding gene ChrX:32735846-32739977 (-)
AKR/J MGP_AKRJ_G0035554
 protein coding gene ChrX:33490640-33495295 (-)
BALB/cJ MGP_BALBcJ_G0035618
 protein coding gene ChrX:32403091-32408083 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0036149
 protein coding gene ChrX:33392000-33392600 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J no annotation
FVB/NJ MGP_FVBNJ_G0035399
 protein coding gene ChrX:32267955-32278582 (-)
LP/J MGP_LPJ_G0035532
 protein coding gene ChrX:32771330-32777687 (+)
NOD/ShiLtJ no annotation
NZO/HlLtJ MGP_NZOHlLtJ_G0036165
 protein coding gene ChrX:32490208-32544439 (+)
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    3 phenotype references
Gene Ontology
(GO)
Classifications
less
  • All GO Annotations
    3
  • GO References
    1
Molecular Function

carbohydrate derivative binding
cytoskeletal protein binding
DNA binding
enzyme regulator
hydrolase
ligase
lipid binding
oxidoreductase
RNA binding
signaling receptor activity
signaling receptor binding
transcription
transferase
transporter
Biological Process

carbohydrate derivative metabolism
cell differentiation
cell population proliferation
cellular component organization
DNA-templated transcription
establishment of localization
homeostatic process
immune system process
lipid metabolic process
programmed cell death
protein metabolic process
response to stimulus
signaling
system development
Cellular Component

cell projection
cytoplasmic vesicle
cytoskeleton
cytosol
endoplasmic reticulum
endosome
extracellular region
Golgi apparatus
mitochondrion
membraneless organelle
nucleus
organelle envelope
organelle lumen
plasma membrane
protein-containing complex
synapse
vacuole
Click cells to view annotations.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000095698 Ensembl Gene Model | MGI Sequence Detail 4196 C57BL/6J ±  kb
transcript ENSMUST00000115179 Ensembl | MGI Sequence Detail 685 Not Applicable  
polypeptide ENSMUSP00000110833 Ensembl | MGI Sequence Detail 191 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
  • InterPro Domains
    IPR001356 Homeobox domain
    IPR009057 Homeobox-like domain superfamily
References
more
  • Summaries
    All 12
    Gene Ontology 1
    Phenotypes 3
  • Earliest
    J:106768 Maclean JA 2nd, et al., Rhox homeobox gene cluster: recent duplication of three family members. Genesis. 2006 Mar;44(3):122-9
  • Latest
    J:306454 Tan K, et al., The Rhox gene cluster suppresses germline LINE1 transposition. Proc Natl Acad Sci U S A. 2021 Jun 8;118(23):e2024785118
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
11/19/2024
MGI 6.24 		The Jackson Laboratory