Gm8115 Pseudogene Detail

Summary

• Symbol
  Gm8115
• Name
  predicted gene 8115

• Feature Type
  pseudogene
• IDs
  MGI:3648794
  NCBI Gene: 666455
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr5:57418659-57419347 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 5, 30.92 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  149 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3648794	pseudogene	Chr5:57418614-57419349 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0013093	pseudogene	Chr5:56544761-56545496 (+)
A/J	MGP_AJ_G0013080	pseudogene	Chr5:54447270-54448005 (+)
AKR/J	MGP_AKRJ_G0013045	pseudogene	Chr5:56248623-56249358 (+)
BALB/cJ	MGP_BALBcJ_G0013057	pseudogene	Chr5:55036402-55037137 (+)
C3H/HeJ	MGP_C3HHeJ_G0012909	pseudogene	Chr5:56539003-56539738 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0013418	pseudogene	Chr5:58769127-58769862 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011607	pseudogene	Chr5:51020691-51021425 (+)
CAST/EiJ	MGP_CASTEiJ_G0012640	pseudogene	Chr5:55507272-55508007 (+)
CBA/J	MGP_CBAJ_G0012876	pseudogene	Chr5:60770413-60771148 (+)
DBA/2J	MGP_DBA2J_G0012954	pseudogene	Chr5:54515444-54516179 (+)
FVB/NJ	MGP_FVBNJ_G0012961	pseudogene	Chr5:53786613-53787348 (+)
LP/J	MGP_LPJ_G0013028	pseudogene	Chr5:56909662-56910397 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012975	pseudogene	Chr5:62377263-62377998 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013420	pseudogene	Chr5:55826348-55827083 (+)
PWK/PhJ	MGP_PWKPhJ_G0012458	pseudogene	Chr5:53555977-53556712 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0012259	pseudogene	Chr5:55294737-55295471 (+)
WSB/EiJ	MGP_WSBEiJ_G0012676	pseudogene	Chr5:55962764-55963499 (+)

Homology

• Gene Tree
  Gm8115
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  4 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Spontaneous
  1
• Genomic Mutations
  3 involving Gm8115
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000104560 (Evidence)
• NCBI Gene
  666455

Representative Sequences			Length	Strain/Species
genomic	666455	NCBI Gene Model | MGI Sequence Detail	689	C57BL/6J

References

• Summaries
  All 8

  Phenotypes 4
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17