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Gm5554 Pseudogene Detail
Summary
  • Symbol
    Gm5554
  • Name
    predicted gene 5554
  • Feature Type
    pseudogene
  • IDs
    MGI:3648967
    NCBI Gene: 433883
  • Alliance
    gene page
Location &
Maps
more
  • Sequence Map
    Chr5:43120747-43121952 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 5, 23.46 cM
  • Mapping Data
    1 experiment
Strain
Comparison
more
  • SNPs within 2kb
    189 from dbSNP Build 142
  • Strain Annotations
    8
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3648967
 pseudogene Chr5:43120442-43122249 (-)
129S1/SvImJ no annotation
A/J MGP_AJ_G0014126
 pseudogene Chr8:98379051-98380186 (+)
AKR/J MGP_AKRJ_G0012569
 pseudogene Chr4:35269037-35270132 (+)
BALB/cJ MGP_BALBcJ_G0011248
 pseudogene Chr16:46112067-46113214 (-)
C3H/HeJ no annotation
C57BL/6NJ MGP_C57BL6NJ_G0014066
 pseudogene Chr6:135237662-135238860 (-)
CAROLI/EiJ no annotation
CAST/EiJ no annotation
CBA/J no annotation
DBA/2J MGP_DBA2J_G0012483
 pseudogene Chr4:34351118-34352208 (+)
FVB/NJ MGP_FVBNJ_G0012935
 pseudogene Chr5:39673267-39674694 (-)
LP/J no annotation
NOD/ShiLtJ MGP_NODShiLtJ_G0011167
 pseudogene Chr16:51101378-51102595 (-)
NZO/HlLtJ no annotation
PWK/PhJ no annotation
SPRET/EiJ no annotation
WSB/EiJ no annotation



Homology
less
Human Diseases
less
  • References
    1 with disease annotations
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    6 phenotype references
  • All Mutations and Alleles
    5
  • Chemically induced (ENU)
    1
  • Chemically induced (other)
    2
  • Radiation induced
    1
  • Spontaneous
    1
  • Genomic Mutations
    5 involving Gm5554
  • Find Mice (IMSR)
    0 strains or lines available
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    706
Sequences &
Gene Models
less
  • All Sequences
    11
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000106622 Ensembl Gene Model | MGI Sequence Detail 1206 C57BL/6J ±  kb
transcript ENSMUST00000199726 Ensembl | MGI Sequence Detail 1206 Not Applicable  
For the selected sequence
References
more
  • Summaries
    All 10
    Diseases 1
    Phenotypes 6
  • Earliest
    J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17
  • Latest
    J:100332 Wilson L, et al., Random mutagenesis of proximal mouse chromosome 5 uncovers predominantly embryonic lethal mutations. Genome Res. 2005 Aug;15(8):1095-105
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/17/2024
MGI 6.24 		The Jackson Laboratory