E330040D14Rik Gene Detail

Summary

• Symbol
  E330040D14Rik
• Name
  RIKEN cDNA E330040D14 gene
• Synonyms
  EG433270

• Feature Type
  lncRNA gene
• IDs
  MGI:3649088
  NCBI Gene: 433270
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr1:10037539-10038912 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 1, Syntenic
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  118 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649088	lncRNA gene	Chr1:10037539-10038912 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0000338	unclassified gene	Chr1:7231023-7233347 (+)
A/J	MGP_AJ_G0000310	unclassified gene	Chr1:7288063-7289444 (+)
AKR/J	MGP_AKRJ_G0000299	unclassified gene	Chr1:7175867-7177248 (+)
BALB/cJ	MGP_BALBcJ_G0000304	unclassified gene	Chr1:7021569-7023448 (+)
C3H/HeJ	MGP_C3HHeJ_G0000290	unclassified gene	Chr1:7096932-7098301 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0000419	unclassified gene	Chr1:7568756-7571262 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0000182	unclassified gene	Chr1:6125314-6126650 (+)
CAST/EiJ	MGP_CASTEiJ_G0000285	unclassified gene	Chr1:7291730-7293074 (+)
CBA/J	MGP_CBAJ_G0000284	unclassified gene	Chr1:7728005-7729374 (+)
DBA/2J	MGP_DBA2J_G0000286	unclassified gene	Chr1:6906935-6908277 (+)
FVB/NJ	MGP_FVBNJ_G0000299	unclassified gene	Chr1:6821651-6823652 (+)
LP/J	MGP_LPJ_G0000343	unclassified gene	Chr1:7446544-7447913 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0000301	unclassified gene	Chr1:8394267-8395646 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0000414	unclassified gene	Chr1:7077904-7080260 (+)
PWK/PhJ	MGP_PWKPhJ_G0000241	unclassified gene	Chr1:6773447-6774814 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0000223	unclassified gene	Chr1:7245921-7247287 (+)
WSB/EiJ	MGP_WSBEiJ_G0000290	unclassified gene	Chr1:7109465-7110807 (+)

Homology

• Gene Tree
  E330040D14Rik
  

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706
• cDNA Data
  1

Tissue x Stage Matrix

• Other Mouse Links
  GEO
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000104025 (Evidence)
• NCBI Gene
  433270

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000104025	Ensembl Gene Model | MGI Sequence Detail	1374	C57BL/6J
transcript	AK087915	GenBank | ENA | DDBJ | MGI Sequence Detail	1412	C57BL/6J

Molecular
Reagents

• All nucleic 1

  cDNA 1

References

• Summaries
  All 6
• Earliest
  J:63103 Mouse Genome Database and National Center for Biotechnology Information, Entrez Gene Load. Database Release. 2000;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;