Pla2g4c-ps Pseudogene Detail

Summary

• Symbol
  Pla2g4c-ps
• Name
  phospholipase A2, group IVC (cytosolic, calcium-independent), pseudogene
• Synonyms
  Gm38689, Gm7989

• Feature Type
  pseudogene
• IDs
  MGI:5645818
  NCBI Gene: 666225
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr7:13107211-13119308 bp, + strand

  From NCBI annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 7, 7.86 cM
• Mapping Data
  1 experiment

Strain
Comparison

• SNPs within 2kb
  512 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_5645818	pseudogene	Chr7:13095036-13120620 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0040527	pseudogene	Chr7:10755120-10780006 (+)
A/J	MGP_AJ_G0040513	pseudogene	Chr7:10619534-10646473 (+)
AKR/J	MGP_AKRJ_G0040434	pseudogene	Chr7:10867178-10894910 (+)
BALB/cJ	MGP_BALBcJ_G0040510	pseudogene	Chr7:10715626-10742280 (+)
C3H/HeJ	MGP_C3HHeJ_G0040134	pseudogene	Chr7:11014400-11039200 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0041139	pseudogene	Chr7:11354321-11398922 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0037417	pseudogene	Chr7:12434695-12456387 (+)
CAST/EiJ	MGP_CASTEiJ_G0039193	pseudogene	Chr7:8490348-8522591 (+)
CBA/J	MGP_CBAJ_G0040103	pseudogene	Chr7:11551454-11583569 (+)
DBA/2J	MGP_DBA2J_G0040308	pseudogene	Chr7:10478633-10504173 (+)
FVB/NJ	MGP_FVBNJ_G0040256	pseudogene	Chr7:10502017-10526980 (+)
LP/J	MGP_LPJ_G0040352	pseudogene	Chr7:10876358-10905409 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0040249	pseudogene	Chr7:11651454-11691144 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0041214	pseudogene	Chr7:10657835-10684307 (+)
PWK/PhJ	MGP_PWKPhJ_G0038875	pseudogene	Chr7:8948062-8974700 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0038578	pseudogene	Chr7:6707455-6734344 (+)
WSB/EiJ	MGP_WSBEiJ_G0039438	pseudogene	Chr7:10676495-10705790 (+)

Homology

• Gene Tree
  Pla2g4c-ps
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000108293 (Evidence)
• NCBI Gene
  666225

Representative Sequences			Length	Strain/Species
genomic	666225	NCBI Gene Model | MGI Sequence Detail	12098	C57BL/6J

Other
Accession IDs

MGI:3649100, MGI:5621574

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:91388 Mouse Genome Informatics Scientific Curators, Obtaining and Loading Genome Assembly Coordinates from Ensembl Annotations. 2005;