Gm12795 Pseudogene Detail

Summary

• Symbol
  Gm12795
• Name
  predicted gene 12795

• Feature Type
  pseudogene
• IDs
  MGI:3649205
  NCBI Gene: 100416255
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:101219374-101220087 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 46.70 cM

Strain
Comparison

• SNPs within 2kb
  126 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649205	pseudogene	Chr4:101219275-101220114 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0012791	pseudogene	Chr4:101666088-101666801 (-)
A/J	MGP_AJ_G0012776	pseudogene	Chr4:98110761-98111474 (-)
AKR/J	MGP_AKRJ_G0012747	pseudogene	Chr4:100486781-100487494 (-)
BALB/cJ	MGP_BALBcJ_G0012757	pseudogene	Chr4:98312748-98313461 (-)
C3H/HeJ	MGP_C3HHeJ_G0012614	pseudogene	Chr4:101282666-101283379 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0013089	pseudogene	Chr4:105515007-105515720 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011369	pseudogene	Chr4:93385512-93386254 (-)
CAST/EiJ	MGP_CASTEiJ_G0012368	pseudogene	Chr4:99070329-99071047 (-)
CBA/J	MGP_CBAJ_G0012590	pseudogene	Chr4:108821318-108822031 (-)
DBA/2J	MGP_DBA2J_G0012653	pseudogene	Chr4:97811327-97812040 (-)
FVB/NJ	MGP_FVBNJ_G0012657	pseudogene	Chr4:96642930-96643643 (-)
LP/J	MGP_LPJ_G0012728	pseudogene	Chr4:101961477-101962190 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012666	pseudogene	Chr4:114361383-114362096 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0013096	pseudogene	Chr4:100741445-100742158 (-)
PWK/PhJ	MGP_PWKPhJ_G0012192	pseudogene	Chr4:95975170-95975849 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0012001	pseudogene	Chr4:98186270-98186987 (-)
WSB/EiJ	MGP_WSBEiJ_G0012395	pseudogene	Chr4:100902625-100903338 (-)

Homology

• Gene Tree
  Gm12795
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Chemically induced (other)
  2
• Radiation induced
  1
• Genomic Mutations
  3 involving Gm12795
• Find Mice (IMSR)
  1 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  23
• RefSeq
  1

• Ensembl
  ENSMUSG00000083614 (Evidence)
• NCBI Gene
  100416255

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083614	Ensembl Gene Model | MGI Sequence Detail	714	C57BL/6J
transcript	ENSMUST00000117594	Ensembl | MGI Sequence Detail	539	Not Applicable

Molecular
Reagents

• 
  

  Microarray probesets 1

References

• Summaries
  All 10

  Phenotypes 3
• Earliest
  J:23389 Roderick TH, Using inversions to detect and study recessive lethals and detrimentals in mice, in Utilization of Mammalian Specific Locus Studies in Hazard Evaluation and Estimation of Genetic Risk. 1983:135-67.
• Latest
  J:157972 Mouse Genome Informatics Scientific Curators, Mouse Microarray Data Integration in Mouse Genome Informatics, the Affymetrix GeneChip Mouse Genome U74 Array Platform (A, B, C v2). Database Download. 2010;