Gm11790 Pseudogene Detail

Summary

• Symbol
  Gm11790
• Name
  predicted gene 11790

• Feature Type
  pseudogene
• IDs
  MGI:3649211
  NCBI Gene: 100416922
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr11:121056297-121056751 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 11, 85.02 cM

Strain
Comparison

• SNPs within 2kb
  136 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649211	pseudogene	Chr11:121056042-121056780 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0010891	pseudogene	Chr11:125701391-125701845 (-)
A/J	MGP_AJ_G0010889	pseudogene	Chr11:120089697-120090151 (-)
AKR/J	MGP_AKRJ_G0010849	pseudogene	Chr11:123724764-123725218 (-)
BALB/cJ	MGP_BALBcJ_G0010865	pseudogene	Chr11:120455579-120456039 (-)
C3H/HeJ	MGP_C3HHeJ_G0010768	pseudogene	Chr11:124048262-124048716 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011140	pseudogene	Chr11:129516787-129517241 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0009747	pseudogene	Chr11:117068292-117068742 (-)
CAST/EiJ	MGP_CASTEiJ_G0010593	pseudogene	Chr11:125549812-125550271 (-)
CBA/J	MGP_CBAJ_G0010739	pseudogene	Chr11:134550049-134550503 (-)
DBA/2J	MGP_DBA2J_G0010786	pseudogene	Chr11:119454345-119454799 (-)
FVB/NJ	MGP_FVBNJ_G0010801	pseudogene	Chr11:119171145-119171599 (-)
LP/J	MGP_LPJ_G0010874	pseudogene	Chr11:125979832-125980286 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0010779	pseudogene	Chr11:133363118-133363572 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011118	pseudogene	Chr11:124401299-124401759 (-)
PWK/PhJ	MGP_PWKPhJ_G0010483	pseudogene	Chr11:120899288-120899743 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010299	pseudogene	Chr11:124158487-124158944 (-)
WSB/EiJ	MGP_WSBEiJ_G0010644	pseudogene	Chr11:124377214-124377676 (-)

Homology

• Gene Tree
  Gm11790
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000081835 (Evidence)
• NCBI Gene
  100416922

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000081835	Ensembl Gene Model | MGI Sequence Detail	455	C57BL/6J
transcript	ENSMUST00000119569	Ensembl | MGI Sequence Detail	455	Not Applicable

References

• Summaries
  All 5
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;