Gm13975 Pseudogene Detail

Summary

• Symbol
  Gm13975
• Name
  predicted gene 13975

• Feature Type
  pseudogene
• IDs
  MGI:3649230
  NCBI Gene: 100043219
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:114538593-114539374 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 57.82 cM

Strain
Comparison

• SNPs within 2kb
  133 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649230	pseudogene	Chr2:114538574-114539408 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0011831	pseudogene	Chr2:117195763-117196544 (+)
A/J	MGP_AJ_G0011822	pseudogene	Chr2:112454941-112455722 (+)
AKR/J	MGP_AKRJ_G0011790	pseudogene	Chr2:115583918-115584699 (+)
BALB/cJ	MGP_BALBcJ_G0011800	pseudogene	Chr2:112683021-112683802 (+)
C3H/HeJ	MGP_C3HHeJ_G0011686	pseudogene	Chr2:115985710-115986491 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012102	pseudogene	Chr2:121079810-121080591 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010590	pseudogene	Chr2:107591063-107591837 (+)
CAST/EiJ	MGP_CASTEiJ_G0011473	pseudogene	Chr2:116289888-116290669 (+)
CBA/J	MGP_CBAJ_G0011661	pseudogene	Chr2:125317266-125318047 (+)
DBA/2J	MGP_DBA2J_G0011715	pseudogene	Chr2:111879372-111880153 (+)
FVB/NJ	MGP_FVBNJ_G0011716	pseudogene	Chr2:110748363-110749144 (+)
LP/J	MGP_LPJ_G0011782	pseudogene	Chr2:117503477-117504258 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011721	pseudogene	Chr2:129680121-129680902 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012096	pseudogene	Chr2:115652424-115653205 (+)
PWK/PhJ	MGP_PWKPhJ_G0011321	pseudogene	Chr2:111418248-111419029 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011142	pseudogene	Chr2:114771642-114772428 (+)
WSB/EiJ	MGP_WSBEiJ_G0011497	pseudogene	Chr2:116471761-116472542 (+)

Homology

• Gene Tree
  Gm13975
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  2
• Chemically induced (other)
  1
• Radiation induced
  1
• Genomic Mutations
  2 involving Gm13975
• Find Mice (IMSR)
  0 strains or lines available

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  22
• RefSeq
  1

• Ensembl
  ENSMUSG00000082997 (Evidence)
• NCBI Gene
  100043219

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000082997	Ensembl Gene Model | MGI Sequence Detail	782	C57BL/6J
transcript	ENSMUST00000119253	Ensembl | MGI Sequence Detail	782	Not Applicable

References

• Summaries
  All 8

  Phenotypes 3
• Earliest
  J:109968 Roderick TH, et al., Nineteen paracentric chromosomal inversions in mice. Genetics. 1974 Jan;76(1):109-17