Gm12455 Pseudogene Detail

Summary

• Symbol
  Gm12455
• Name
  predicted gene 12455

• Feature Type
  pseudogene
• IDs
  MGI:3649235
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:44382922-44383337 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 23.53 cM

Strain
Comparison

• SNPs within 2kb
  130 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649235	pseudogene	Chr4:44382922-44383337 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0012629	pseudogene	Chr4:42551995-42552410 (+)
A/J	MGP_AJ_G0012620	pseudogene	Chr4:41042170-41042585 (+)
AKR/J	MGP_AKRJ_G0012588	pseudogene	Chr4:41997955-41998371 (+)
BALB/cJ	MGP_BALBcJ_G0012604	pseudogene	Chr4:41128597-41129012 (+)
C3H/HeJ	MGP_C3HHeJ_G0012466	pseudogene	Chr4:42616017-42616432 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0012923	pseudogene	Chr4:44176933-44177348 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0011241	pseudogene	Chr4:38451080-38451489 (+)
CAST/EiJ	MGP_CASTEiJ_G0012221	pseudogene	Chr4:42133320-42133735 (+)
CBA/J	MGP_CBAJ_G0012444	pseudogene	Chr4:45550393-45550808 (+)
DBA/2J	MGP_DBA2J_G0012502	pseudogene	Chr4:40938173-40938588 (+)
FVB/NJ	MGP_FVBNJ_G0012503	pseudogene	Chr4:40166586-40167001 (+)
LP/J	MGP_LPJ_G0012571	pseudogene	Chr4:42624153-42624568 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0012507	pseudogene	Chr4:48723845-48724261 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0012923	pseudogene	Chr4:42217503-42217918 (+)
PWK/PhJ	MGP_PWKPhJ_G0012050	pseudogene	Chr4:40984176-40984592 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0011866	pseudogene	Chr4:41736768-41737146 (+)
WSB/EiJ	MGP_WSBEiJ_G0012244	pseudogene	Chr4:42089068-42089484 (+)

Homology

• Gene Tree
  Gm12455
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000083803 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000083803	Ensembl Gene Model | MGI Sequence Detail	416	C57BL/6J
transcript	ENSMUST00000121242	Ensembl | MGI Sequence Detail	416	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;