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Gm13344 Gene Detail
Summary
  • Symbol
    Gm13344
  • Name
    predicted gene 13344
  • Feature Type
    lncRNA gene
  • IDs
    MGI:3649239
    NCBI Gene: 115489437
  • Alliance
    gene page
  • Transcription Start Sites
    2 TSS
Location &
Maps
more
  • Sequence Map
    Chr2:19433915-19436794 bp, - strand
    From Ensembl annotation of GRCm39
  • View this region in JBrowse
  • Genome Browsers
    Ensembl | UCSC | NCBI
  • Genetic Map
    Chromosome 2, 13.34 cM
Strain
Comparison
more
  • SNPs within 2kb
    175 from dbSNP Build 142
  • Strain Annotations
    18
For selected strains:
Strain Gene Model ID Feature Type Coordinates Select Strains
C57BL/6J MGI_C57BL6J_3649239
 lncRNA gene Chr2:19433915-19437229 (-)
129S1/SvImJ MGP_129S1SvImJ_G0003511
 antisense lncRNA gene Chr2:17168328-17171207 (-)
A/J MGP_AJ_G0003491
 antisense lncRNA gene Chr2:16462683-16465564 (-)
AKR/J MGP_AKRJ_G0003470
 antisense lncRNA gene Chr2:17034500-17037381 (-)
BALB/cJ MGP_BALBcJ_G0003480
 antisense lncRNA gene Chr2:16517020-16519899 (-)
C3H/HeJ MGP_C3HHeJ_G0003428
 antisense lncRNA gene Chr2:16941673-16944552 (-)
C57BL/6NJ MGP_C57BL6NJ_G0003618
 antisense lncRNA gene Chr2:17633149-17636028 (-)
CAROLI/EiJ MGP_CAROLIEiJ_G0003128
 antisense lncRNA gene Chr2:15840748-15843600 (-)
CAST/EiJ MGP_CASTEiJ_G0003391
 antisense lncRNA gene Chr2:16891585-16894464 (-)
CBA/J MGP_CBAJ_G0003425
 antisense lncRNA gene Chr2:18393733-18396612 (-)
DBA/2J MGP_DBA2J_G0003433
 antisense lncRNA gene Chr2:16402585-16405466 (-)
FVB/NJ MGP_FVBNJ_G0003452
 antisense lncRNA gene Chr2:16207300-16210179 (-)
LP/J MGP_LPJ_G0003506
 antisense lncRNA gene Chr2:16987783-16990662 (-)
NOD/ShiLtJ MGP_NODShiLtJ_G0003440
 antisense lncRNA gene Chr2:18340652-18343532 (-)
NZO/HlLtJ MGP_NZOHlLtJ_G0003621
 antisense lncRNA gene Chr2:16970882-16973761 (-)
PWK/PhJ MGP_PWKPhJ_G0003347
 antisense lncRNA gene Chr2:16278554-16281408 (-)
SPRET/EiJ MGP_SPRETEiJ_G0003292
 antisense lncRNA gene Chr2:17106354-17109213 (-)
WSB/EiJ MGP_WSBEiJ_G0003426
 antisense lncRNA gene Chr2:17050561-17053442 (-)



Homology
less
Mutations,
Alleles, and
Phenotypes
less
  • Phenotype Summary
    1 phenotype from 1 allele in 1 genetic background
    1 phenotype reference
Gene Ontology
(GO)
Classifications
less
Molecular Function

No experimental evidence to support Molecular Function annotation, following literature review. See J:73796.
Biological Process

No experimental evidence to support Biological Process annotation, following literature review. See J:73796.
Cellular Component

No experimental evidence to support Cellular Component annotation, following literature review. See J:73796.
Expression
less
Expression Overview

early conceptus
embryo ectoderm
embryo endoderm
embryo mesoderm
embryo mesenchyme
extraembryonic component
alimentary system
auditory system
branchial arches
cardiovascular system
connective tissue
endocrine system
exocrine system
hemolymphoid system
integumental system
limbs
liver and biliary system
musculoskeletal system
nervous system
olfactory system
reproductive system
respiratory system
urinary system
visual system
Click cells to view annotations.


  • Assay Results
    709
  • Tissues
    1
  • Literature Summary
    2
Sequences &
Gene Models
less
  • All Sequences
    25
  • RefSeq
    1
  • UniProt
    1
Representative SequencesLengthStrain/SpeciesFlank
genomic ENSMUSG00000087103 Ensembl Gene Model | MGI Sequence Detail 2880 C57BL/6J ±  kb
transcript ENSMUST00000137714 Ensembl | MGI Sequence Detail 1557 Not Applicable  
polypeptide S0BDP2 UniProt | EBI | MGI Sequence Detail 89 Not Applicable  
For the selected sequence
Protein
Information
less
  • UniProt
    1 Sequence
Molecular
Reagents
less
  • All nucleic 2
    cDNA 1
    Primer pair 1
References
more
  • Summaries
    All 9
    Developmental Gene Expression 2
    Phenotypes 1
  • Earliest
    J:195133 Semba K, et al., Ectopic expression of Ptf1a induces spinal defects, urogenital defects, and anorectal malformations in Danforth's short tail mice. PLoS Genet. 2013 Feb;9(2):e1003204
  • Latest
    J:330741 Orchard P, et al., Genome-wide chromatin accessibility and transcriptome profiling show minimal epigenome changes and coordinated transcriptional dysregulation of hedgehog signaling in Danforth's short tail mice. Hum Mol Genet. 2019 Mar 1;28(5):736-750
Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
Citing These Resources
Funding Information
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Send questions and comments to User Support. 		last database update
12/10/2024
MGI 6.24 		The Jackson Laboratory