Gm13345 Pseudogene Detail

Summary

• Symbol
  Gm13345
• Name
  predicted gene 13345

• Feature Type
  pseudogene
• IDs
  MGI:3649240
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr2:19513901-19514128 bp, - strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 2, 13.49 cM

Strain
Comparison

• SNPs within 2kb
  68 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649240	pseudogene	Chr2:19513901-19514128 (-)
129S1/SvImJ	MGP_129S1SvImJ_G0011550	pseudogene	Chr2:17259105-17259332 (-)
A/J	MGP_AJ_G0011545	pseudogene	Chr2:16541807-16542034 (-)
AKR/J	MGP_AKRJ_G0011511	pseudogene	Chr2:17127341-17127568 (-)
BALB/cJ	MGP_BALBcJ_G0011526	pseudogene	Chr2:16600382-16600609 (-)
C3H/HeJ	MGP_C3HHeJ_G0011411	pseudogene	Chr2:17026187-17026414 (-)
C57BL/6NJ	MGP_C57BL6NJ_G0011817	pseudogene	Chr2:17721184-17721411 (-)
CAROLI/EiJ	MGP_CAROLIEiJ_G0010357	pseudogene	Chr2:15921263-15921488 (-)
CAST/EiJ	MGP_CASTEiJ_G0011212	pseudogene	Chr2:16978075-16978302 (-)
CBA/J	MGP_CBAJ_G0011383	pseudogene	Chr2:18483512-18483739 (-)
DBA/2J	MGP_DBA2J_G0011441	pseudogene	Chr2:16483319-16483546 (-)
FVB/NJ	MGP_FVBNJ_G0011443	pseudogene	Chr2:16285348-16285575 (-)
LP/J	MGP_LPJ_G0011507	pseudogene	Chr2:17069104-17069331 (-)
NOD/ShiLtJ	MGP_NODShiLtJ_G0011441	pseudogene	Chr2:18424401-18424628 (-)
NZO/HlLtJ	MGP_NZOHlLtJ_G0011805	pseudogene	Chr2:17055069-17055296 (-)
PWK/PhJ	MGP_PWKPhJ_G0011069	pseudogene	Chr2:16361325-16361552 (-)
SPRET/EiJ	MGP_SPRETEiJ_G0010895	pseudogene	Chr2:17189544-17189775 (-)
WSB/EiJ	MGP_WSBEiJ_G0011235	pseudogene	Chr2:17130118-17130345 (-)

Homology

• Gene Tree
  Gm13345
  

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000084160 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000084160	Ensembl Gene Model | MGI Sequence Detail	228	C57BL/6J
transcript	ENSMUST00000121928	Ensembl | MGI Sequence Detail	228	Not Applicable

References

• Summaries
  All 3
• Earliest
  J:23000 MGD Nomenclature Committee, Nomenclature Committee Use. 1995-02-14;
• Latest
  J:109762 Mouse Genome Informatics and VEGA Genome Database Project, Collaboration to Associate VEGA (Vertebrate Genome Annotation) Mouse Gene Models with MGI Markers. Database Release. 2006;