Trp73os Gene Detail

Summary

• Symbol
  Trp73os
• Name
  transformation related protein 73, opposite strand
• Synonyms
  Gm13116

• Feature Type
  antisense lncRNA gene
  BioType Conflict
  
• IDs
  MGI:3649248
• Alliance
  gene page

Location &
Maps

• Sequence Map
  Chr4:154177936-154182810 bp, + strand

  From Ensembl annotation of GRCm39
  

• View this region in JBrowse
  

• Genome Browsers
  Ensembl | UCSC | NCBI

• Genetic Map
  Chromosome 4, 83.82 cM

Strain
Comparison

• SNPs within 2kb
  244 from dbSNP Build 142
• Strain Annotations
  18

Strain	Gene Model ID	Feature Type	Coordinates
C57BL/6J	MGI_C57BL6J_3649248	antisense lncRNA gene	Chr4:154177936-154182810 (+)
129S1/SvImJ	MGP_129S1SvImJ_G0004014	antisense lncRNA gene	Chr4:158340195-158345069 (+)
A/J	MGP_AJ_G0003995	antisense lncRNA gene	Chr4:151696855-151701727 (+)
AKR/J	MGP_AKRJ_G0003972	antisense lncRNA gene	Chr4:155835655-155840527 (+)
BALB/cJ	MGP_BALBcJ_G0003981	antisense lncRNA gene	Chr4:152164431-152169295 (+)
C3H/HeJ	MGP_C3HHeJ_G0003928	antisense lncRNA gene	Chr4:156369788-156374660 (+)
C57BL/6NJ	MGP_C57BL6NJ_G0004130	antisense lncRNA gene	Chr4:163999583-164004457 (+)
CAROLI/EiJ	MGP_CAROLIEiJ_G0003611	antisense lncRNA gene	Chr4:143995574-144000638 (+)
CAST/EiJ	MGP_CASTEiJ_G0003891	antisense lncRNA gene	Chr4:153765037-153769924 (+)
CBA/J	MGP_CBAJ_G0003921	antisense lncRNA gene	Chr4:168922054-168926924 (+)
DBA/2J	MGP_DBA2J_G0003937	antisense lncRNA gene	Chr4:151723660-151728532 (+)
FVB/NJ	MGP_FVBNJ_G0003956	antisense lncRNA gene	Chr4:150923766-150928636 (+)
LP/J	MGP_LPJ_G0004017	antisense lncRNA gene	Chr4:158249981-158254847 (+)
NOD/ShiLtJ	MGP_NODShiLtJ_G0003944	antisense lncRNA gene	Chr4:171843514-171848386 (+)
NZO/HlLtJ	MGP_NZOHlLtJ_G0004124	antisense lncRNA gene	Chr4:156401220-156406086 (+)
PWK/PhJ	MGP_PWKPhJ_G0003845	antisense lncRNA gene	Chr4:147804683-147811847 (+)
SPRET/EiJ	MGP_SPRETEiJ_G0003790	antisense lncRNA gene	Chr4:150689534-150696445 (+)
WSB/EiJ	MGP_WSBEiJ_G0003927	antisense lncRNA gene	Chr4:156566875-156571759 (+)

Homology

• Gene Tree
  Trp73os
  

Mutations,
Alleles, and
Phenotypes

• Phenotype Summary
  3 phenotype references
  

• All Mutations and Alleles
  3
• Targeted
  3
• Genomic Mutations
  3 involving Trp73os
• Find Mice (IMSR)
  0 strains or lines available

Gene Ontology
(GO)
Classifications

Expression

• Assay Results
  706

Tissue x Stage Matrix

• Other Mouse Links
  Expression Atlas

Sequences &
Gene Models

• All Sequences
  20

• Ensembl
  ENSMUSG00000087071 (Evidence)

Representative Sequences			Length	Strain/Species
genomic	ENSMUSG00000087071	Ensembl Gene Model | MGI Sequence Detail	4875	C57BL/6J
transcript	ENSMUST00000143429	Ensembl | MGI Sequence Detail	2192	Not Applicable

References

• Summaries
  All 7

  Phenotypes 3
• Earliest
  J:84714 Nishijima I, et al., Two new balancer chromosomes on mouse chromosome 4 to facilitate functional annotation of human chromosome 1p. Genesis. 2003 Jul;36(3):142-8
• Latest
  J:196071 van der Weyden L, et al., Cancer of mice and men: old twists and new tails. J Pathol. 2013 May;230(1):4-16